Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Scfd1Q8BRF7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Scfd1Q8BRF7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Scfd1Q8BRF7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Scfd1Q8BRF7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Scfd1Q8BRF7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Scfd1Q8BRF7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29■■■□□ 2.23
Scfd1Q8BRF7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Scfd1Q8BRF7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Scfd1Q8BRF7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Scfd1Q8BRF7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Scfd1Q8BRF7 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.96■■■□□ 2.23
Scfd1Q8BRF7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
Scfd1Q8BRF7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Scfd1Q8BRF7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Scfd1Q8BRF7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Scfd1Q8BRF7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Scfd1Q8BRF7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.9■■■□□ 2.22
Scfd1Q8BRF7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Scfd1Q8BRF7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Scfd1Q8BRF7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Scfd1Q8BRF7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.88■■■□□ 2.21
Scfd1Q8BRF7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Scfd1Q8BRF7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.88■■■□□ 2.21
Scfd1Q8BRF7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
Scfd1Q8BRF7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Scfd1Q8BRF7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Scfd1Q8BRF7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.87■■■□□ 2.21
Scfd1Q8BRF7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.86■■■□□ 2.21
Scfd1Q8BRF7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Scfd1Q8BRF7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Scfd1Q8BRF7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
Scfd1Q8BRF7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Scfd1Q8BRF7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
Scfd1Q8BRF7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Scfd1Q8BRF7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Scfd1Q8BRF7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Scfd1Q8BRF7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Scfd1Q8BRF7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Scfd1Q8BRF7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Scfd1Q8BRF7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Scfd1Q8BRF7 Gm8503-201ENSMUST00000118131 455 ntBASIC28.8■■■□□ 2.2
Scfd1Q8BRF7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Scfd1Q8BRF7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Scfd1Q8BRF7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Scfd1Q8BRF7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Scfd1Q8BRF7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Scfd1Q8BRF7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Scfd1Q8BRF7 Gm6821-201ENSMUST00000107540 542 ntBASIC28.76■■■□□ 2.19
Scfd1Q8BRF7 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.74■■■□□ 2.19
Scfd1Q8BRF7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
Scfd1Q8BRF7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Scfd1Q8BRF7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Scfd1Q8BRF7 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.7■■■□□ 2.18
Scfd1Q8BRF7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.69■■■□□ 2.18
Scfd1Q8BRF7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Scfd1Q8BRF7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.67■■■□□ 2.18
Scfd1Q8BRF7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Scfd1Q8BRF7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Scfd1Q8BRF7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Scfd1Q8BRF7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.66■■■□□ 2.18
Scfd1Q8BRF7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Scfd1Q8BRF7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Scfd1Q8BRF7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Scfd1Q8BRF7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.64■■■□□ 2.17
Scfd1Q8BRF7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Scfd1Q8BRF7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Scfd1Q8BRF7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Scfd1Q8BRF7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.61■■■□□ 2.17
Scfd1Q8BRF7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Scfd1Q8BRF7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Scfd1Q8BRF7 Nkain2-201ENSMUST00000092602 558 ntBASIC28.6■■■□□ 2.17
Scfd1Q8BRF7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Scfd1Q8BRF7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.57■■■□□ 2.16
Scfd1Q8BRF7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Scfd1Q8BRF7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Scfd1Q8BRF7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.56■■■□□ 2.16
Scfd1Q8BRF7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.56■■■□□ 2.16
Scfd1Q8BRF7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
Scfd1Q8BRF7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Scfd1Q8BRF7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
Scfd1Q8BRF7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.54■■■□□ 2.16
Scfd1Q8BRF7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Scfd1Q8BRF7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Scfd1Q8BRF7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.52■■■□□ 2.16
Scfd1Q8BRF7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Scfd1Q8BRF7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Scfd1Q8BRF7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Scfd1Q8BRF7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
Scfd1Q8BRF7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.49■■■□□ 2.15
Scfd1Q8BRF7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Scfd1Q8BRF7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Scfd1Q8BRF7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Scfd1Q8BRF7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Scfd1Q8BRF7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.45■■■□□ 2.14
Scfd1Q8BRF7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Scfd1Q8BRF7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Scfd1Q8BRF7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Scfd1Q8BRF7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Scfd1Q8BRF7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms