Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Suds3Q8BR65 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Suds3Q8BR65 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.05■■□□□ 1.6
Suds3Q8BR65 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Suds3Q8BR65 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.04■■□□□ 1.6
Suds3Q8BR65 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Suds3Q8BR65 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Suds3Q8BR65 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Suds3Q8BR65 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Suds3Q8BR65 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Suds3Q8BR65 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Suds3Q8BR65 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Suds3Q8BR65 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Suds3Q8BR65 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25■■□□□ 1.59
Suds3Q8BR65 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Suds3Q8BR65 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Suds3Q8BR65 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Suds3Q8BR65 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
Suds3Q8BR65 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Suds3Q8BR65 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Suds3Q8BR65 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Suds3Q8BR65 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.95■■□□□ 1.58
Suds3Q8BR65 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.95■■□□□ 1.58
Suds3Q8BR65 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Suds3Q8BR65 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Suds3Q8BR65 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.93■■□□□ 1.58
Suds3Q8BR65 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Suds3Q8BR65 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Suds3Q8BR65 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Suds3Q8BR65 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
Suds3Q8BR65 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.91■■□□□ 1.58
Suds3Q8BR65 Gm9397-201ENSMUST00000200125 605 ntBASIC24.89■■□□□ 1.58
Suds3Q8BR65 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Suds3Q8BR65 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Suds3Q8BR65 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Suds3Q8BR65 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Suds3Q8BR65 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Suds3Q8BR65 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Suds3Q8BR65 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.86■■□□□ 1.57
Suds3Q8BR65 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Suds3Q8BR65 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Suds3Q8BR65 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.86■■□□□ 1.57
Suds3Q8BR65 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Suds3Q8BR65 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Suds3Q8BR65 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Suds3Q8BR65 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.84■■□□□ 1.57
Suds3Q8BR65 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Suds3Q8BR65 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Suds3Q8BR65 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Suds3Q8BR65 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.83■■□□□ 1.57
Suds3Q8BR65 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Suds3Q8BR65 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Suds3Q8BR65 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Suds3Q8BR65 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Suds3Q8BR65 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.82■■□□□ 1.56
Suds3Q8BR65 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Suds3Q8BR65 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Suds3Q8BR65 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.81■■□□□ 1.56
Suds3Q8BR65 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Suds3Q8BR65 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Suds3Q8BR65 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Suds3Q8BR65 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.79■■□□□ 1.56
Suds3Q8BR65 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Suds3Q8BR65 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Suds3Q8BR65 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Suds3Q8BR65 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
Suds3Q8BR65 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Suds3Q8BR65 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Suds3Q8BR65 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Suds3Q8BR65 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Suds3Q8BR65 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Suds3Q8BR65 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Suds3Q8BR65 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Suds3Q8BR65 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.76■■□□□ 1.55
Suds3Q8BR65 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Suds3Q8BR65 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Suds3Q8BR65 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Suds3Q8BR65 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Suds3Q8BR65 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
Suds3Q8BR65 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Suds3Q8BR65 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Suds3Q8BR65 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Suds3Q8BR65 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Suds3Q8BR65 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Suds3Q8BR65 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Suds3Q8BR65 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.71■■□□□ 1.55
Suds3Q8BR65 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Suds3Q8BR65 Amer2-203ENSMUST00000225247 2662 ntBASIC24.7■■□□□ 1.54
Suds3Q8BR65 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Suds3Q8BR65 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
Suds3Q8BR65 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Suds3Q8BR65 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Suds3Q8BR65 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.68■■□□□ 1.54
Suds3Q8BR65 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.68■■□□□ 1.54
Suds3Q8BR65 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Suds3Q8BR65 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Suds3Q8BR65 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Suds3Q8BR65 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Suds3Q8BR65 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Suds3Q8BR65 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms