Protein–RNA interactions for Protein: Q80X56

Trim69, E3 ubiquitin-protein ligase TRIM69, mousemouse

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim69Q80X56 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim69Q80X56 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Trim69Q80X56 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim69Q80X56 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim69Q80X56 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.62■■□□□ 1.37
Trim69Q80X56 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Trim69Q80X56 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Trim69Q80X56 Gm8503-201ENSMUST00000118131 455 ntBASIC23.6■■□□□ 1.37
Trim69Q80X56 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Trim69Q80X56 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Trim69Q80X56 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Trim69Q80X56 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim69Q80X56 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Trim69Q80X56 Gm6821-201ENSMUST00000107540 542 ntBASIC23.56■■□□□ 1.36
Trim69Q80X56 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Trim69Q80X56 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim69Q80X56 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim69Q80X56 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Trim69Q80X56 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim69Q80X56 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim69Q80X56 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.51■■□□□ 1.35
Trim69Q80X56 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim69Q80X56 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim69Q80X56 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.5■■□□□ 1.35
Trim69Q80X56 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trim69Q80X56 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim69Q80X56 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.49■■□□□ 1.35
Trim69Q80X56 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Trim69Q80X56 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim69Q80X56 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trim69Q80X56 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim69Q80X56 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim69Q80X56 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.48■■□□□ 1.35
Trim69Q80X56 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim69Q80X56 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.47■■□□□ 1.35
Trim69Q80X56 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim69Q80X56 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim69Q80X56 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim69Q80X56 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trim69Q80X56 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
Trim69Q80X56 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Trim69Q80X56 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.42■■□□□ 1.34
Trim69Q80X56 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trim69Q80X56 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim69Q80X56 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Trim69Q80X56 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim69Q80X56 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.4■■□□□ 1.34
Trim69Q80X56 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.4■■□□□ 1.34
Trim69Q80X56 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.39■■□□□ 1.34
Trim69Q80X56 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trim69Q80X56 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim69Q80X56 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim69Q80X56 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim69Q80X56 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Trim69Q80X56 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim69Q80X56 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim69Q80X56 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim69Q80X56 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim69Q80X56 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.35■■□□□ 1.33
Trim69Q80X56 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim69Q80X56 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim69Q80X56 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim69Q80X56 Nkain2-201ENSMUST00000092602 558 ntBASIC23.32■■□□□ 1.32
Trim69Q80X56 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trim69Q80X56 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim69Q80X56 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trim69Q80X56 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trim69Q80X56 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trim69Q80X56 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim69Q80X56 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.3■■□□□ 1.32
Trim69Q80X56 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.3■■□□□ 1.32
Trim69Q80X56 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Trim69Q80X56 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim69Q80X56 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.29■■□□□ 1.32
Trim69Q80X56 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Trim69Q80X56 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim69Q80X56 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Trim69Q80X56 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim69Q80X56 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim69Q80X56 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim69Q80X56 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim69Q80X56 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.25■■□□□ 1.31
Trim69Q80X56 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
Trim69Q80X56 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim69Q80X56 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim69Q80X56 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.23■■□□□ 1.31
Trim69Q80X56 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.23■■□□□ 1.31
Trim69Q80X56 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.23■■□□□ 1.31
Trim69Q80X56 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim69Q80X56 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Trim69Q80X56 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
Trim69Q80X56 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim69Q80X56 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim69Q80X56 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim69Q80X56 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim69Q80X56 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim69Q80X56 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim69Q80X56 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim69Q80X56 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
Trim69Q80X56 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms