Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Sh3tc2Q80VA5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Sh3tc2Q80VA5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Sh3tc2Q80VA5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.12■■□□□ 1.93
Sh3tc2Q80VA5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Sh3tc2Q80VA5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Sh3tc2Q80VA5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.11■■□□□ 1.93
Sh3tc2Q80VA5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.1■■□□□ 1.93
Sh3tc2Q80VA5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Sh3tc2Q80VA5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Sh3tc2Q80VA5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Sh3tc2Q80VA5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Sh3tc2Q80VA5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Sh3tc2Q80VA5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Sh3tc2Q80VA5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.06■■□□□ 1.92
Sh3tc2Q80VA5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Sh3tc2Q80VA5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.06■■□□□ 1.92
Sh3tc2Q80VA5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Sh3tc2Q80VA5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.05■■□□□ 1.92
Sh3tc2Q80VA5 Nkain2-201ENSMUST00000092602 558 ntBASIC27.05■■□□□ 1.92
Sh3tc2Q80VA5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.03■■□□□ 1.92
Sh3tc2Q80VA5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sh3tc2Q80VA5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Sh3tc2Q80VA5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sh3tc2Q80VA5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sh3tc2Q80VA5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sh3tc2Q80VA5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sh3tc2Q80VA5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.01■■□□□ 1.92
Sh3tc2Q80VA5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Sh3tc2Q80VA5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.01■■□□□ 1.91
Sh3tc2Q80VA5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27■■□□□ 1.91
Sh3tc2Q80VA5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Sh3tc2Q80VA5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Sh3tc2Q80VA5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Sh3tc2Q80VA5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Sh3tc2Q80VA5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
Sh3tc2Q80VA5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.95■■□□□ 1.9
Sh3tc2Q80VA5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
Sh3tc2Q80VA5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Sh3tc2Q80VA5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Sh3tc2Q80VA5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Sh3tc2Q80VA5 Gm7432-201ENSMUST00000210343 879 ntBASIC26.93■■□□□ 1.9
Sh3tc2Q80VA5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Sh3tc2Q80VA5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Sh3tc2Q80VA5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Sh3tc2Q80VA5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Sh3tc2Q80VA5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
Sh3tc2Q80VA5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.89■■□□□ 1.9
Sh3tc2Q80VA5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
Sh3tc2Q80VA5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Sh3tc2Q80VA5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.88■■□□□ 1.89
Sh3tc2Q80VA5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.85■■□□□ 1.89
Sh3tc2Q80VA5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Sh3tc2Q80VA5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
Sh3tc2Q80VA5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.85■■□□□ 1.89
Sh3tc2Q80VA5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Sh3tc2Q80VA5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Sh3tc2Q80VA5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Sh3tc2Q80VA5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Sh3tc2Q80VA5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Sh3tc2Q80VA5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Sh3tc2Q80VA5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Sh3tc2Q80VA5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
Sh3tc2Q80VA5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.8■■□□□ 1.88
Sh3tc2Q80VA5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Sh3tc2Q80VA5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Sh3tc2Q80VA5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
Sh3tc2Q80VA5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.78■■□□□ 1.88
Sh3tc2Q80VA5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sh3tc2Q80VA5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sh3tc2Q80VA5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sh3tc2Q80VA5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Sh3tc2Q80VA5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Sh3tc2Q80VA5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sh3tc2Q80VA5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Sh3tc2Q80VA5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sh3tc2Q80VA5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Sh3tc2Q80VA5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Sh3tc2Q80VA5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.73■■□□□ 1.87
Sh3tc2Q80VA5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Sh3tc2Q80VA5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sh3tc2Q80VA5 Gm11599-201ENSMUST00000118720 878 ntBASIC26.72■■□□□ 1.87
Sh3tc2Q80VA5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.72■■□□□ 1.87
Sh3tc2Q80VA5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Sh3tc2Q80VA5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sh3tc2Q80VA5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sh3tc2Q80VA5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Sh3tc2Q80VA5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.71■■□□□ 1.87
Sh3tc2Q80VA5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Sh3tc2Q80VA5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.69■■□□□ 1.86
Sh3tc2Q80VA5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
Sh3tc2Q80VA5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Sh3tc2Q80VA5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sh3tc2Q80VA5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sh3tc2Q80VA5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Sh3tc2Q80VA5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sh3tc2Q80VA5 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.67■■□□□ 1.86
Sh3tc2Q80VA5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.66■■□□□ 1.86
Sh3tc2Q80VA5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.65■■□□□ 1.86
Sh3tc2Q80VA5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms