Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm8503-201ENSMUST00000118131 455 ntBASIC30.46■■■□□ 2.47
Nup98Q6PFD9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Nup98Q6PFD9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
Nup98Q6PFD9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Nup98Q6PFD9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Nup98Q6PFD9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.46
Nup98Q6PFD9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Nup98Q6PFD9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Nup98Q6PFD9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Nup98Q6PFD9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
Nup98Q6PFD9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.43■■■□□ 2.46
Nup98Q6PFD9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Nup98Q6PFD9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Nup98Q6PFD9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.41■■■□□ 2.46
Nup98Q6PFD9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.4■■■□□ 2.46
Nup98Q6PFD9 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.4■■■□□ 2.46
Nup98Q6PFD9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Nup98Q6PFD9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Nup98Q6PFD9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Nup98Q6PFD9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Nup98Q6PFD9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
Nup98Q6PFD9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Nup98Q6PFD9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Nup98Q6PFD9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Nup98Q6PFD9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Nup98Q6PFD9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Nup98Q6PFD9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Nup98Q6PFD9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Nup98Q6PFD9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.32■■■□□ 2.44
Nup98Q6PFD9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Nup98Q6PFD9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Nup98Q6PFD9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Nup98Q6PFD9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Nup98Q6PFD9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Nup98Q6PFD9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Nup98Q6PFD9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Nup98Q6PFD9 Gm6821-201ENSMUST00000107540 542 ntBASIC30.26■■■□□ 2.43
Nup98Q6PFD9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Nup98Q6PFD9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
Nup98Q6PFD9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Nup98Q6PFD9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Nup98Q6PFD9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Nup98Q6PFD9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Nup98Q6PFD9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Nup98Q6PFD9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Nup98Q6PFD9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Nup98Q6PFD9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.21■■■□□ 2.43
Nup98Q6PFD9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
Nup98Q6PFD9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Nup98Q6PFD9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Nup98Q6PFD9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Nup98Q6PFD9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.14■■■□□ 2.42
Nup98Q6PFD9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Nup98Q6PFD9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.12■■■□□ 2.41
Nup98Q6PFD9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Nup98Q6PFD9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.12■■■□□ 2.41
Nup98Q6PFD9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Nup98Q6PFD9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.09■■■□□ 2.41
Nup98Q6PFD9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Nup98Q6PFD9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.09■■■□□ 2.41
Nup98Q6PFD9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
Nup98Q6PFD9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
Nup98Q6PFD9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Nup98Q6PFD9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
Nup98Q6PFD9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Nup98Q6PFD9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
Nup98Q6PFD9 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.01■■■□□ 2.39
Nup98Q6PFD9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30■■■□□ 2.39
Nup98Q6PFD9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30■■■□□ 2.39
Nup98Q6PFD9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.99■■■□□ 2.39
Nup98Q6PFD9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Nup98Q6PFD9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.98■■■□□ 2.39
Nup98Q6PFD9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Nup98Q6PFD9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Nup98Q6PFD9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.96■■■□□ 2.39
Nup98Q6PFD9 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.96■■■□□ 2.39
Nup98Q6PFD9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Nup98Q6PFD9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Nup98Q6PFD9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.95■■■□□ 2.39
Nup98Q6PFD9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.94■■■□□ 2.38
Nup98Q6PFD9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Nup98Q6PFD9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.93■■■□□ 2.38
Nup98Q6PFD9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Nup98Q6PFD9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Nup98Q6PFD9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.91■■■□□ 2.38
Nup98Q6PFD9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.91■■■□□ 2.38
Nup98Q6PFD9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Nup98Q6PFD9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Nup98Q6PFD9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Nup98Q6PFD9 Nkain2-201ENSMUST00000092602 558 ntBASIC29.88■■■□□ 2.37
Nup98Q6PFD9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Nup98Q6PFD9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Nup98Q6PFD9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Nup98Q6PFD9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.87■■■□□ 2.37
Nup98Q6PFD9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Nup98Q6PFD9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Nup98Q6PFD9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Nup98Q6PFD9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Nup98Q6PFD9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Nup98Q6PFD9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms