Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
Clcn1Q64347 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC32.02■■■□□ 2.72
Clcn1Q64347 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Clcn1Q64347 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Clcn1Q64347 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
Clcn1Q64347 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Clcn1Q64347 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Clcn1Q64347 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Clcn1Q64347 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.97■■■□□ 2.71
Clcn1Q64347 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Clcn1Q64347 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Clcn1Q64347 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.95■■■□□ 2.71
Clcn1Q64347 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Clcn1Q64347 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.7
Clcn1Q64347 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Clcn1Q64347 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Clcn1Q64347 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.92■■■□□ 2.7
Clcn1Q64347 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
Clcn1Q64347 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.89■■■□□ 2.7
Clcn1Q64347 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.89■■■□□ 2.7
Clcn1Q64347 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
Clcn1Q64347 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Clcn1Q64347 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Clcn1Q64347 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.86■■■□□ 2.69
Clcn1Q64347 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Clcn1Q64347 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.81■■■□□ 2.68
Clcn1Q64347 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Clcn1Q64347 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Clcn1Q64347 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Clcn1Q64347 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.79■■■□□ 2.68
Clcn1Q64347 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
Clcn1Q64347 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Clcn1Q64347 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.78■■■□□ 2.68
Clcn1Q64347 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Clcn1Q64347 Nkain2-201ENSMUST00000092602 558 ntBASIC31.77■■■□□ 2.68
Clcn1Q64347 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
Clcn1Q64347 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Clcn1Q64347 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Clcn1Q64347 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Clcn1Q64347 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.74■■■□□ 2.67
Clcn1Q64347 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Clcn1Q64347 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Clcn1Q64347 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Clcn1Q64347 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.7■■■□□ 2.67
Clcn1Q64347 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Clcn1Q64347 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31.7■■■□□ 2.66
Clcn1Q64347 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Clcn1Q64347 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Clcn1Q64347 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Clcn1Q64347 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Clcn1Q64347 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Clcn1Q64347 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Clcn1Q64347 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.66■■■□□ 2.66
Clcn1Q64347 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Clcn1Q64347 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.65■■■□□ 2.66
Clcn1Q64347 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.64■■■□□ 2.66
Clcn1Q64347 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
Clcn1Q64347 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Clcn1Q64347 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Clcn1Q64347 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Clcn1Q64347 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Clcn1Q64347 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Clcn1Q64347 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.59■■■□□ 2.65
Clcn1Q64347 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Clcn1Q64347 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Clcn1Q64347 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Clcn1Q64347 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Clcn1Q64347 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Clcn1Q64347 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.57■■■□□ 2.64
Clcn1Q64347 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Clcn1Q64347 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Clcn1Q64347 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Clcn1Q64347 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Clcn1Q64347 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.48■■■□□ 2.63
Clcn1Q64347 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Clcn1Q64347 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Clcn1Q64347 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.46■■■□□ 2.63
Clcn1Q64347 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Clcn1Q64347 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Clcn1Q64347 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Clcn1Q64347 Gm7432-201ENSMUST00000210343 879 ntBASIC31.43■■■□□ 2.62
Clcn1Q64347 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
Clcn1Q64347 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.41■■■□□ 2.62
Clcn1Q64347 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Clcn1Q64347 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Clcn1Q64347 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.38■■■□□ 2.61
Clcn1Q64347 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.38■■■□□ 2.61
Clcn1Q64347 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Clcn1Q64347 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Clcn1Q64347 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Clcn1Q64347 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Clcn1Q64347 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.35■■■□□ 2.61
Clcn1Q64347 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Clcn1Q64347 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Clcn1Q64347 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Clcn1Q64347 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Clcn1Q64347 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Clcn1Q64347 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
Clcn1Q64347 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Clcn1Q64347 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.31■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms