Protein–RNA interactions for Protein: Q62471

Lcn3, Vomeronasal secretory protein 1, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn3Q62471 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Lcn3Q62471 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lcn3Q62471 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lcn3Q62471 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lcn3Q62471 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lcn3Q62471 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lcn3Q62471 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lcn3Q62471 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Lcn3Q62471 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lcn3Q62471 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lcn3Q62471 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Lcn3Q62471 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lcn3Q62471 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lcn3Q62471 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lcn3Q62471 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lcn3Q62471 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lcn3Q62471 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lcn3Q62471 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lcn3Q62471 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lcn3Q62471 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lcn3Q62471 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Lcn3Q62471 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn3Q62471 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn3Q62471 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn3Q62471 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn3Q62471 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn3Q62471 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Lcn3Q62471 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lcn3Q62471 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Lcn3Q62471 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lcn3Q62471 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.02■□□□□ 0.96
Lcn3Q62471 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Lcn3Q62471 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.02■□□□□ 0.96
Lcn3Q62471 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Lcn3Q62471 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Lcn3Q62471 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lcn3Q62471 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lcn3Q62471 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lcn3Q62471 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lcn3Q62471 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lcn3Q62471 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lcn3Q62471 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Lcn3Q62471 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lcn3Q62471 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lcn3Q62471 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lcn3Q62471 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lcn3Q62471 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lcn3Q62471 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lcn3Q62471 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Lcn3Q62471 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lcn3Q62471 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lcn3Q62471 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lcn3Q62471 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Lcn3Q62471 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lcn3Q62471 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Lcn3Q62471 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lcn3Q62471 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lcn3Q62471 Mipep-204ENSMUST00000225043 1548 ntBASIC20.95■□□□□ 0.94
Lcn3Q62471 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lcn3Q62471 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lcn3Q62471 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.94■□□□□ 0.94
Lcn3Q62471 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lcn3Q62471 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lcn3Q62471 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Lcn3Q62471 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lcn3Q62471 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Lcn3Q62471 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lcn3Q62471 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lcn3Q62471 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lcn3Q62471 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.91■□□□□ 0.94
Lcn3Q62471 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Lcn3Q62471 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Lcn3Q62471 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lcn3Q62471 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lcn3Q62471 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lcn3Q62471 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Lcn3Q62471 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lcn3Q62471 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lcn3Q62471 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lcn3Q62471 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lcn3Q62471 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lcn3Q62471 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lcn3Q62471 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lcn3Q62471 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.87■□□□□ 0.93
Lcn3Q62471 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lcn3Q62471 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lcn3Q62471 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lcn3Q62471 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn3Q62471 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn3Q62471 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn3Q62471 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn3Q62471 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Lcn3Q62471 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn3Q62471 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn3Q62471 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Lcn3Q62471 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Lcn3Q62471 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lcn3Q62471 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lcn3Q62471 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lcn3Q62471 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms