Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Ddx4Q61496 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Ddx4Q61496 Nkain2-201ENSMUST00000092602 558 ntBASIC28.17■■■□□ 2.1
Ddx4Q61496 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.16■■■□□ 2.1
Ddx4Q61496 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.15■■■□□ 2.1
Ddx4Q61496 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ddx4Q61496 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ddx4Q61496 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Ddx4Q61496 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.13■■■□□ 2.09
Ddx4Q61496 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ddx4Q61496 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Ddx4Q61496 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.11■■■□□ 2.09
Ddx4Q61496 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ddx4Q61496 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ddx4Q61496 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ddx4Q61496 Gm7432-201ENSMUST00000210343 879 ntBASIC28.08■■■□□ 2.09
Ddx4Q61496 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Ddx4Q61496 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ddx4Q61496 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.06■■■□□ 2.08
Ddx4Q61496 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Ddx4Q61496 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
Ddx4Q61496 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ddx4Q61496 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
Ddx4Q61496 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Ddx4Q61496 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Ddx4Q61496 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Ddx4Q61496 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ddx4Q61496 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.01■■■□□ 2.07
Ddx4Q61496 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Ddx4Q61496 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ddx4Q61496 Gm30346-201ENSMUST00000218641 1699 ntBASIC28■■■□□ 2.07
Ddx4Q61496 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ddx4Q61496 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ddx4Q61496 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Ddx4Q61496 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.98■■■□□ 2.07
Ddx4Q61496 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Ddx4Q61496 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Ddx4Q61496 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ddx4Q61496 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Ddx4Q61496 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Ddx4Q61496 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Ddx4Q61496 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Ddx4Q61496 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ddx4Q61496 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ddx4Q61496 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ddx4Q61496 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
Ddx4Q61496 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Ddx4Q61496 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Ddx4Q61496 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Ddx4Q61496 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Ddx4Q61496 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Ddx4Q61496 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ddx4Q61496 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Ddx4Q61496 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.86■■■□□ 2.05
Ddx4Q61496 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx4Q61496 Gm11599-201ENSMUST00000118720 878 ntBASIC27.84■■■□□ 2.05
Ddx4Q61496 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx4Q61496 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx4Q61496 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.83■■■□□ 2.05
Ddx4Q61496 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
Ddx4Q61496 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ddx4Q61496 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.81■■■□□ 2.04
Ddx4Q61496 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ddx4Q61496 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Ddx4Q61496 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Ddx4Q61496 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Ddx4Q61496 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.79■■■□□ 2.04
Ddx4Q61496 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Ddx4Q61496 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Ddx4Q61496 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Ddx4Q61496 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.78■■■□□ 2.04
Ddx4Q61496 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.78■■■□□ 2.04
Ddx4Q61496 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Ddx4Q61496 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.76■■■□□ 2.03
Ddx4Q61496 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ddx4Q61496 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Ddx4Q61496 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.73■■■□□ 2.03
Ddx4Q61496 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.72■■■□□ 2.03
Ddx4Q61496 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ddx4Q61496 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Ddx4Q61496 Mir6538-201ENSMUST00000183713 110 ntBASIC27.69■■■□□ 2.02
Ddx4Q61496 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
Ddx4Q61496 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx4Q61496 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Ddx4Q61496 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ddx4Q61496 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ddx4Q61496 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.65■■■□□ 2.02
Ddx4Q61496 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Ddx4Q61496 Gm11175-201ENSMUST00000116172 543 ntBASIC27.64■■■□□ 2.02
Ddx4Q61496 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Ddx4Q61496 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Ddx4Q61496 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Ddx4Q61496 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ddx4Q61496 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.6■■■□□ 2.01
Ddx4Q61496 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Ddx4Q61496 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.58■■■□□ 2.01
Ddx4Q61496 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.58■■■□□ 2.01
Ddx4Q61496 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.56■■■□□ 2
Ddx4Q61496 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.56■■■□□ 2
Ddx4Q61496 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.56■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms