Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hcfc1Q61191 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hcfc1Q61191 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.7■■□□□ 1.06
Hcfc1Q61191 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.7■■□□□ 1.06
Hcfc1Q61191 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hcfc1Q61191 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hcfc1Q61191 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hcfc1Q61191 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hcfc1Q61191 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.67■■□□□ 1.06
Hcfc1Q61191 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Hcfc1Q61191 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.67■■□□□ 1.06
Hcfc1Q61191 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.67■■□□□ 1.06
Hcfc1Q61191 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hcfc1Q61191 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hcfc1Q61191 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.67■■□□□ 1.06
Hcfc1Q61191 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hcfc1Q61191 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hcfc1Q61191 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Hcfc1Q61191 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hcfc1Q61191 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hcfc1Q61191 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hcfc1Q61191 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hcfc1Q61191 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hcfc1Q61191 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hcfc1Q61191 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hcfc1Q61191 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hcfc1Q61191 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hcfc1Q61191 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.04
Hcfc1Q61191 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hcfc1Q61191 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.57■■□□□ 1.04
Hcfc1Q61191 Gm7432-201ENSMUST00000210343 879 ntBASIC21.56■■□□□ 1.04
Hcfc1Q61191 Nkain2-201ENSMUST00000092602 558 ntBASIC21.56■■□□□ 1.04
Hcfc1Q61191 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hcfc1Q61191 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hcfc1Q61191 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hcfc1Q61191 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hcfc1Q61191 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hcfc1Q61191 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hcfc1Q61191 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hcfc1Q61191 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Hcfc1Q61191 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Hcfc1Q61191 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hcfc1Q61191 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hcfc1Q61191 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Hcfc1Q61191 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hcfc1Q61191 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hcfc1Q61191 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
Hcfc1Q61191 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hcfc1Q61191 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Hcfc1Q61191 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hcfc1Q61191 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hcfc1Q61191 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.5■■□□□ 1.03
Hcfc1Q61191 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Hcfc1Q61191 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hcfc1Q61191 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hcfc1Q61191 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.47■■□□□ 1.03
Hcfc1Q61191 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hcfc1Q61191 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.46■■□□□ 1.03
Hcfc1Q61191 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Hcfc1Q61191 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.45■■□□□ 1.02
Hcfc1Q61191 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
Hcfc1Q61191 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hcfc1Q61191 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hcfc1Q61191 Gm11599-201ENSMUST00000118720 878 ntBASIC21.44■■□□□ 1.02
Hcfc1Q61191 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hcfc1Q61191 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hcfc1Q61191 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hcfc1Q61191 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.41■■□□□ 1.02
Hcfc1Q61191 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hcfc1Q61191 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Hcfc1Q61191 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.38■■□□□ 1.01
Hcfc1Q61191 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Hcfc1Q61191 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hcfc1Q61191 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.37■■□□□ 1.01
Hcfc1Q61191 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hcfc1Q61191 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hcfc1Q61191 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.36■■□□□ 1.01
Hcfc1Q61191 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Hcfc1Q61191 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hcfc1Q61191 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hcfc1Q61191 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hcfc1Q61191 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hcfc1Q61191 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hcfc1Q61191 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.31■■□□□ 1
Hcfc1Q61191 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.31■■□□□ 1
Hcfc1Q61191 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.3■■□□□ 1
Hcfc1Q61191 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hcfc1Q61191 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hcfc1Q61191 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hcfc1Q61191 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.3■■□□□ 1
Hcfc1Q61191 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.3■■□□□ 1
Hcfc1Q61191 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hcfc1Q61191 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.28■■□□□ 1
Hcfc1Q61191 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hcfc1Q61191 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.28■■□□□ 1
Hcfc1Q61191 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hcfc1Q61191 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hcfc1Q61191 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hcfc1Q61191 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hcfc1Q61191 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms