Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
NfkbibQ60778 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
NfkbibQ60778 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
NfkbibQ60778 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
NfkbibQ60778 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
NfkbibQ60778 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
NfkbibQ60778 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NfkbibQ60778 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
NfkbibQ60778 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NfkbibQ60778 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
NfkbibQ60778 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
NfkbibQ60778 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
NfkbibQ60778 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
NfkbibQ60778 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
NfkbibQ60778 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NfkbibQ60778 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.46■■■□□ 2.47
NfkbibQ60778 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
NfkbibQ60778 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
NfkbibQ60778 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.44■■■□□ 2.46
NfkbibQ60778 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NfkbibQ60778 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NfkbibQ60778 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NfkbibQ60778 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
NfkbibQ60778 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.42■■■□□ 2.46
NfkbibQ60778 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
NfkbibQ60778 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NfkbibQ60778 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NfkbibQ60778 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.39■■■□□ 2.46
NfkbibQ60778 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NfkbibQ60778 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NfkbibQ60778 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NfkbibQ60778 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NfkbibQ60778 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NfkbibQ60778 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
NfkbibQ60778 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.35■■■□□ 2.45
NfkbibQ60778 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
NfkbibQ60778 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
NfkbibQ60778 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
NfkbibQ60778 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.33■■■□□ 2.45
NfkbibQ60778 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
NfkbibQ60778 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
NfkbibQ60778 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
NfkbibQ60778 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
NfkbibQ60778 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
NfkbibQ60778 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NfkbibQ60778 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.28■■■□□ 2.44
NfkbibQ60778 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
NfkbibQ60778 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
NfkbibQ60778 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
NfkbibQ60778 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NfkbibQ60778 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.22■■■□□ 2.43
NfkbibQ60778 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NfkbibQ60778 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
NfkbibQ60778 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.18■■■□□ 2.42
NfkbibQ60778 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.18■■■□□ 2.42
NfkbibQ60778 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NfkbibQ60778 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.17■■■□□ 2.42
NfkbibQ60778 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NfkbibQ60778 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
NfkbibQ60778 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NfkbibQ60778 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NfkbibQ60778 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
NfkbibQ60778 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NfkbibQ60778 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.12■■■□□ 2.41
NfkbibQ60778 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
NfkbibQ60778 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NfkbibQ60778 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
NfkbibQ60778 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
NfkbibQ60778 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
NfkbibQ60778 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
NfkbibQ60778 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
NfkbibQ60778 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
NfkbibQ60778 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.06■■■□□ 2.4
NfkbibQ60778 Zxda-201ENSMUST00000117281 2621 ntBASIC30.05■■■□□ 2.4
NfkbibQ60778 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
NfkbibQ60778 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NfkbibQ60778 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.03■■■□□ 2.4
NfkbibQ60778 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
NfkbibQ60778 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.01■■■□□ 2.39
NfkbibQ60778 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NfkbibQ60778 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NfkbibQ60778 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
NfkbibQ60778 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NfkbibQ60778 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.97■■■□□ 2.39
NfkbibQ60778 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
NfkbibQ60778 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
NfkbibQ60778 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.96■■■□□ 2.39
NfkbibQ60778 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.96■■■□□ 2.39
NfkbibQ60778 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
NfkbibQ60778 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
NfkbibQ60778 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
NfkbibQ60778 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
NfkbibQ60778 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
NfkbibQ60778 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
NfkbibQ60778 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.91■■■□□ 2.38
NfkbibQ60778 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
NfkbibQ60778 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NfkbibQ60778 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
NfkbibQ60778 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
NfkbibQ60778 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms