Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trav2Q5R1I9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.82■□□□□ 0.76
Trav2Q5R1I9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav2Q5R1I9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trav2Q5R1I9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav2Q5R1I9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav2Q5R1I9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav2Q5R1I9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav2Q5R1I9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.79■□□□□ 0.76
Trav2Q5R1I9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav2Q5R1I9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav2Q5R1I9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav2Q5R1I9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav2Q5R1I9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav2Q5R1I9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav2Q5R1I9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav2Q5R1I9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav2Q5R1I9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav2Q5R1I9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Trav2Q5R1I9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav2Q5R1I9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav2Q5R1I9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav2Q5R1I9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav2Q5R1I9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.71■□□□□ 0.75
Trav2Q5R1I9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav2Q5R1I9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav2Q5R1I9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav2Q5R1I9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav2Q5R1I9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trav2Q5R1I9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav2Q5R1I9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav2Q5R1I9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav2Q5R1I9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav2Q5R1I9 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.67■□□□□ 0.74
Trav2Q5R1I9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav2Q5R1I9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav2Q5R1I9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav2Q5R1I9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.66■□□□□ 0.74
Trav2Q5R1I9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav2Q5R1I9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trav2Q5R1I9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Trav2Q5R1I9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Trav2Q5R1I9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Trav2Q5R1I9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trav2Q5R1I9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav2Q5R1I9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav2Q5R1I9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav2Q5R1I9 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.62■□□□□ 0.73
Trav2Q5R1I9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav2Q5R1I9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav2Q5R1I9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav2Q5R1I9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav2Q5R1I9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav2Q5R1I9 Gm6821-201ENSMUST00000107540 542 ntBASIC19.6■□□□□ 0.73
Trav2Q5R1I9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav2Q5R1I9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav2Q5R1I9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.59■□□□□ 0.73
Trav2Q5R1I9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav2Q5R1I9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav2Q5R1I9 Zxda-201ENSMUST00000117281 2621 ntBASIC19.56■□□□□ 0.72
Trav2Q5R1I9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav2Q5R1I9 Gm8503-201ENSMUST00000118131 455 ntBASIC19.56■□□□□ 0.72
Trav2Q5R1I9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav2Q5R1I9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.56■□□□□ 0.72
Trav2Q5R1I9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav2Q5R1I9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav2Q5R1I9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav2Q5R1I9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.53■□□□□ 0.72
Trav2Q5R1I9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav2Q5R1I9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trav2Q5R1I9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Trav2Q5R1I9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav2Q5R1I9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav2Q5R1I9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.51■□□□□ 0.71
Trav2Q5R1I9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav2Q5R1I9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.51■□□□□ 0.71
Trav2Q5R1I9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.51■□□□□ 0.71
Trav2Q5R1I9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav2Q5R1I9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.5■□□□□ 0.71
Trav2Q5R1I9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav2Q5R1I9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trav2Q5R1I9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav2Q5R1I9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Trav2Q5R1I9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.47■□□□□ 0.71
Trav2Q5R1I9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav2Q5R1I9 Nkain2-201ENSMUST00000092602 558 ntBASIC19.47■□□□□ 0.71
Trav2Q5R1I9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav2Q5R1I9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav2Q5R1I9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav2Q5R1I9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav2Q5R1I9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav2Q5R1I9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Trav2Q5R1I9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav2Q5R1I9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav2Q5R1I9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav2Q5R1I9 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.45■□□□□ 0.7
Trav2Q5R1I9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav2Q5R1I9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav2Q5R1I9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav2Q5R1I9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms