Protein–RNA interactions for Protein: Q4U4S6

Xirp2, Xin actin-binding repeat-containing protein 2, mousemouse

Predictions only

Length 3,784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xirp2Q4U4S6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.5■□□□□ 0.71
Xirp2Q4U4S6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Xirp2Q4U4S6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Xirp2Q4U4S6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Xirp2Q4U4S6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Xirp2Q4U4S6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.48■□□□□ 0.71
Xirp2Q4U4S6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Xirp2Q4U4S6 Gm11175-201ENSMUST00000116172 543 ntBASIC19.47■□□□□ 0.71
Xirp2Q4U4S6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Xirp2Q4U4S6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Xirp2Q4U4S6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Xirp2Q4U4S6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Xirp2Q4U4S6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Xirp2Q4U4S6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Xirp2Q4U4S6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Xirp2Q4U4S6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Xirp2Q4U4S6 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.43■□□□□ 0.7
Xirp2Q4U4S6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Xirp2Q4U4S6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Xirp2Q4U4S6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Xirp2Q4U4S6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Xirp2Q4U4S6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
Xirp2Q4U4S6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Xirp2Q4U4S6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Xirp2Q4U4S6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Xirp2Q4U4S6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Xirp2Q4U4S6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Xirp2Q4U4S6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Xirp2Q4U4S6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.41■□□□□ 0.7
Xirp2Q4U4S6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Xirp2Q4U4S6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Xirp2Q4U4S6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Xirp2Q4U4S6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Xirp2Q4U4S6 Gm11599-201ENSMUST00000118720 878 ntBASIC19.39■□□□□ 0.69
Xirp2Q4U4S6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Xirp2Q4U4S6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Xirp2Q4U4S6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Xirp2Q4U4S6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.37■□□□□ 0.69
Xirp2Q4U4S6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.37■□□□□ 0.69
Xirp2Q4U4S6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Xirp2Q4U4S6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Xirp2Q4U4S6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Xirp2Q4U4S6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Xirp2Q4U4S6 Nkain2-201ENSMUST00000092602 558 ntBASIC19.35■□□□□ 0.69
Xirp2Q4U4S6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.35■□□□□ 0.69
Xirp2Q4U4S6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.34■□□□□ 0.69
Xirp2Q4U4S6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Xirp2Q4U4S6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Xirp2Q4U4S6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Xirp2Q4U4S6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.33■□□□□ 0.69
Xirp2Q4U4S6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Xirp2Q4U4S6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.32■□□□□ 0.68
Xirp2Q4U4S6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Xirp2Q4U4S6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xirp2Q4U4S6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xirp2Q4U4S6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xirp2Q4U4S6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xirp2Q4U4S6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xirp2Q4U4S6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Xirp2Q4U4S6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xirp2Q4U4S6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xirp2Q4U4S6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Xirp2Q4U4S6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Xirp2Q4U4S6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xirp2Q4U4S6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Xirp2Q4U4S6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Xirp2Q4U4S6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Xirp2Q4U4S6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xirp2Q4U4S6 Cap2-205ENSMUST00000225824 1634 ntBASIC19.26■□□□□ 0.67
Xirp2Q4U4S6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Xirp2Q4U4S6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Xirp2Q4U4S6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xirp2Q4U4S6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xirp2Q4U4S6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Xirp2Q4U4S6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xirp2Q4U4S6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.21■□□□□ 0.67
Xirp2Q4U4S6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xirp2Q4U4S6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Xirp2Q4U4S6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xirp2Q4U4S6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.2■□□□□ 0.66
Xirp2Q4U4S6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Xirp2Q4U4S6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xirp2Q4U4S6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xirp2Q4U4S6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xirp2Q4U4S6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Xirp2Q4U4S6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xirp2Q4U4S6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Xirp2Q4U4S6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.16■□□□□ 0.66
Xirp2Q4U4S6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xirp2Q4U4S6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Xirp2Q4U4S6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xirp2Q4U4S6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Xirp2Q4U4S6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Xirp2Q4U4S6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Xirp2Q4U4S6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xirp2Q4U4S6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Xirp2Q4U4S6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xirp2Q4U4S6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.13■□□□□ 0.65
Xirp2Q4U4S6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.12■□□□□ 0.65
Xirp2Q4U4S6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms