Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Lrrk1Q3UHC2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Lrrk1Q3UHC2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Lrrk1Q3UHC2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.45■■□□□ 1.35
Lrrk1Q3UHC2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Lrrk1Q3UHC2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.45■■□□□ 1.34
Lrrk1Q3UHC2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.45■■□□□ 1.34
Lrrk1Q3UHC2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
Lrrk1Q3UHC2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lrrk1Q3UHC2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.43■■□□□ 1.34
Lrrk1Q3UHC2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.43■■□□□ 1.34
Lrrk1Q3UHC2 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.43■■□□□ 1.34
Lrrk1Q3UHC2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Lrrk1Q3UHC2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lrrk1Q3UHC2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.41■■□□□ 1.34
Lrrk1Q3UHC2 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.41■■□□□ 1.34
Lrrk1Q3UHC2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lrrk1Q3UHC2 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.4■■□□□ 1.34
Lrrk1Q3UHC2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Lrrk1Q3UHC2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Lrrk1Q3UHC2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Lrrk1Q3UHC2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.38■■□□□ 1.33
Lrrk1Q3UHC2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Lrrk1Q3UHC2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lrrk1Q3UHC2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lrrk1Q3UHC2 Gm24970-201ENSMUST00000175582 82 ntBASIC23.36■■□□□ 1.33
Lrrk1Q3UHC2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Lrrk1Q3UHC2 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.33■■□□□ 1.33
Lrrk1Q3UHC2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.33■■□□□ 1.33
Lrrk1Q3UHC2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Lrrk1Q3UHC2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Lrrk1Q3UHC2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lrrk1Q3UHC2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lrrk1Q3UHC2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Lrrk1Q3UHC2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lrrk1Q3UHC2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lrrk1Q3UHC2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.29■■□□□ 1.32
Lrrk1Q3UHC2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Lrrk1Q3UHC2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Lrrk1Q3UHC2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Lrrk1Q3UHC2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.26■■□□□ 1.31
Lrrk1Q3UHC2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Lrrk1Q3UHC2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Lrrk1Q3UHC2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lrrk1Q3UHC2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lrrk1Q3UHC2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lrrk1Q3UHC2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lrrk1Q3UHC2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lrrk1Q3UHC2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Lrrk1Q3UHC2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Lrrk1Q3UHC2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lrrk1Q3UHC2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Lrrk1Q3UHC2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Lrrk1Q3UHC2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lrrk1Q3UHC2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lrrk1Q3UHC2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Lrrk1Q3UHC2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.22■■□□□ 1.31
Lrrk1Q3UHC2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Lrrk1Q3UHC2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lrrk1Q3UHC2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Lrrk1Q3UHC2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.2■■□□□ 1.3
Lrrk1Q3UHC2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lrrk1Q3UHC2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Lrrk1Q3UHC2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lrrk1Q3UHC2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lrrk1Q3UHC2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Lrrk1Q3UHC2 Zxda-201ENSMUST00000117281 2621 ntBASIC23.16■■□□□ 1.3
Lrrk1Q3UHC2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Lrrk1Q3UHC2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.16■■□□□ 1.3
Lrrk1Q3UHC2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lrrk1Q3UHC2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Lrrk1Q3UHC2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lrrk1Q3UHC2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lrrk1Q3UHC2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Lrrk1Q3UHC2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.14■■□□□ 1.3
Lrrk1Q3UHC2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Lrrk1Q3UHC2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.12■■□□□ 1.29
Lrrk1Q3UHC2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.12■■□□□ 1.29
Lrrk1Q3UHC2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Lrrk1Q3UHC2 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.12■■□□□ 1.29
Lrrk1Q3UHC2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.11■■□□□ 1.29
Lrrk1Q3UHC2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Lrrk1Q3UHC2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Lrrk1Q3UHC2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lrrk1Q3UHC2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.1■■□□□ 1.29
Lrrk1Q3UHC2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Lrrk1Q3UHC2 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.09■■□□□ 1.29
Lrrk1Q3UHC2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Lrrk1Q3UHC2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.08■■□□□ 1.28
Lrrk1Q3UHC2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lrrk1Q3UHC2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lrrk1Q3UHC2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lrrk1Q3UHC2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Lrrk1Q3UHC2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Lrrk1Q3UHC2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.05■■□□□ 1.28
Lrrk1Q3UHC2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Lrrk1Q3UHC2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lrrk1Q3UHC2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Lrrk1Q3UHC2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.04■■□□□ 1.28
Lrrk1Q3UHC2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms