Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Carmil3Q3UFQ8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Carmil3Q3UFQ8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.58■■■□□ 2.49
Carmil3Q3UFQ8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Carmil3Q3UFQ8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.58■■■□□ 2.49
Carmil3Q3UFQ8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
Carmil3Q3UFQ8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
Carmil3Q3UFQ8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Carmil3Q3UFQ8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
Carmil3Q3UFQ8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Carmil3Q3UFQ8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Carmil3Q3UFQ8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Carmil3Q3UFQ8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
Carmil3Q3UFQ8 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.51■■■□□ 2.47
Carmil3Q3UFQ8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Carmil3Q3UFQ8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.5■■■□□ 2.47
Carmil3Q3UFQ8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Carmil3Q3UFQ8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
Carmil3Q3UFQ8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Carmil3Q3UFQ8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Carmil3Q3UFQ8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Carmil3Q3UFQ8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.46■■■□□ 2.47
Carmil3Q3UFQ8 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.46■■■□□ 2.47
Carmil3Q3UFQ8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.45■■■□□ 2.47
Carmil3Q3UFQ8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.44■■■□□ 2.46
Carmil3Q3UFQ8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Carmil3Q3UFQ8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.42■■■□□ 2.46
Carmil3Q3UFQ8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Carmil3Q3UFQ8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Carmil3Q3UFQ8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Carmil3Q3UFQ8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Carmil3Q3UFQ8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Carmil3Q3UFQ8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Carmil3Q3UFQ8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Carmil3Q3UFQ8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Carmil3Q3UFQ8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Carmil3Q3UFQ8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Carmil3Q3UFQ8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Carmil3Q3UFQ8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Carmil3Q3UFQ8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Carmil3Q3UFQ8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
Carmil3Q3UFQ8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Carmil3Q3UFQ8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Carmil3Q3UFQ8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Carmil3Q3UFQ8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.32■■■□□ 2.44
Carmil3Q3UFQ8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Carmil3Q3UFQ8 Nkain2-201ENSMUST00000092602 558 ntBASIC30.31■■■□□ 2.44
Carmil3Q3UFQ8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.3■■■□□ 2.44
Carmil3Q3UFQ8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
Carmil3Q3UFQ8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.29■■■□□ 2.44
Carmil3Q3UFQ8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.28■■■□□ 2.44
Carmil3Q3UFQ8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Carmil3Q3UFQ8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
Carmil3Q3UFQ8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
Carmil3Q3UFQ8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Carmil3Q3UFQ8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Carmil3Q3UFQ8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Carmil3Q3UFQ8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Carmil3Q3UFQ8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.24■■■□□ 2.43
Carmil3Q3UFQ8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Carmil3Q3UFQ8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Carmil3Q3UFQ8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Carmil3Q3UFQ8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Carmil3Q3UFQ8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.22■■■□□ 2.43
Carmil3Q3UFQ8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Carmil3Q3UFQ8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Carmil3Q3UFQ8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Carmil3Q3UFQ8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.19■■■□□ 2.42
Carmil3Q3UFQ8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Carmil3Q3UFQ8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.15■■■□□ 2.42
Carmil3Q3UFQ8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Carmil3Q3UFQ8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Carmil3Q3UFQ8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Carmil3Q3UFQ8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Carmil3Q3UFQ8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Carmil3Q3UFQ8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Carmil3Q3UFQ8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Carmil3Q3UFQ8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Carmil3Q3UFQ8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
Carmil3Q3UFQ8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Carmil3Q3UFQ8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Carmil3Q3UFQ8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.11■■■□□ 2.41
Carmil3Q3UFQ8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Carmil3Q3UFQ8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.08■■■□□ 2.41
Carmil3Q3UFQ8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Carmil3Q3UFQ8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Carmil3Q3UFQ8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Carmil3Q3UFQ8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
Carmil3Q3UFQ8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.06■■■□□ 2.4
Carmil3Q3UFQ8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Carmil3Q3UFQ8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.06■■■□□ 2.4
Carmil3Q3UFQ8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Carmil3Q3UFQ8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.04■■■□□ 2.4
Carmil3Q3UFQ8 Gm7432-201ENSMUST00000210343 879 ntBASIC30.04■■■□□ 2.4
Carmil3Q3UFQ8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Carmil3Q3UFQ8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Carmil3Q3UFQ8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Carmil3Q3UFQ8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Carmil3Q3UFQ8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Carmil3Q3UFQ8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms