Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Fndc4Q3TR08 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fndc4Q3TR08 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Fndc4Q3TR08 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Fndc4Q3TR08 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Fndc4Q3TR08 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Fndc4Q3TR08 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.77■□□□□ 0.92
Fndc4Q3TR08 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fndc4Q3TR08 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Fndc4Q3TR08 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fndc4Q3TR08 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Fndc4Q3TR08 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.75■□□□□ 0.91
Fndc4Q3TR08 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.75■□□□□ 0.91
Fndc4Q3TR08 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fndc4Q3TR08 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fndc4Q3TR08 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fndc4Q3TR08 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fndc4Q3TR08 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fndc4Q3TR08 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fndc4Q3TR08 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fndc4Q3TR08 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fndc4Q3TR08 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Fndc4Q3TR08 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Fndc4Q3TR08 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.71■□□□□ 0.91
Fndc4Q3TR08 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Fndc4Q3TR08 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fndc4Q3TR08 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.7■□□□□ 0.9
Fndc4Q3TR08 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Fndc4Q3TR08 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fndc4Q3TR08 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fndc4Q3TR08 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Fndc4Q3TR08 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fndc4Q3TR08 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Fndc4Q3TR08 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Fndc4Q3TR08 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Fndc4Q3TR08 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Fndc4Q3TR08 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Fndc4Q3TR08 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Fndc4Q3TR08 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Fndc4Q3TR08 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.66■□□□□ 0.9
Fndc4Q3TR08 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.66■□□□□ 0.9
Fndc4Q3TR08 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Fndc4Q3TR08 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Fndc4Q3TR08 Gm16148-201ENSMUST00000119653 893 ntBASIC20.64■□□□□ 0.89
Fndc4Q3TR08 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Fndc4Q3TR08 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fndc4Q3TR08 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Fndc4Q3TR08 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Fndc4Q3TR08 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Fndc4Q3TR08 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Fndc4Q3TR08 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Fndc4Q3TR08 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fndc4Q3TR08 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fndc4Q3TR08 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fndc4Q3TR08 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Fndc4Q3TR08 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Fndc4Q3TR08 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Fndc4Q3TR08 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Fndc4Q3TR08 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Fndc4Q3TR08 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Fndc4Q3TR08 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.59■□□□□ 0.89
Fndc4Q3TR08 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Fndc4Q3TR08 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Fndc4Q3TR08 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fndc4Q3TR08 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fndc4Q3TR08 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.58■□□□□ 0.88
Fndc4Q3TR08 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Fndc4Q3TR08 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fndc4Q3TR08 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Fndc4Q3TR08 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fndc4Q3TR08 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.55■□□□□ 0.88
Fndc4Q3TR08 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Fndc4Q3TR08 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fndc4Q3TR08 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fndc4Q3TR08 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fndc4Q3TR08 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Fndc4Q3TR08 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fndc4Q3TR08 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fndc4Q3TR08 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fndc4Q3TR08 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fndc4Q3TR08 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fndc4Q3TR08 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fndc4Q3TR08 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Fndc4Q3TR08 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Fndc4Q3TR08 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fndc4Q3TR08 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fndc4Q3TR08 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fndc4Q3TR08 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Fndc4Q3TR08 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Fndc4Q3TR08 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fndc4Q3TR08 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fndc4Q3TR08 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.45■□□□□ 0.86
Fndc4Q3TR08 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Fndc4Q3TR08 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Fndc4Q3TR08 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Fndc4Q3TR08 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Fndc4Q3TR08 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Fndc4Q3TR08 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Fndc4Q3TR08 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fndc4Q3TR08 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms