Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Khdc4Q3TCX3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.41■■□□□ 1.34
Khdc4Q3TCX3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Khdc4Q3TCX3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Khdc4Q3TCX3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.4■■□□□ 1.34
Khdc4Q3TCX3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Khdc4Q3TCX3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Khdc4Q3TCX3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Khdc4Q3TCX3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.38■■□□□ 1.33
Khdc4Q3TCX3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Khdc4Q3TCX3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Khdc4Q3TCX3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Khdc4Q3TCX3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Khdc4Q3TCX3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Khdc4Q3TCX3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Khdc4Q3TCX3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Khdc4Q3TCX3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.34■■□□□ 1.33
Khdc4Q3TCX3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Khdc4Q3TCX3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Khdc4Q3TCX3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Khdc4Q3TCX3 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.33■■□□□ 1.33
Khdc4Q3TCX3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Khdc4Q3TCX3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Khdc4Q3TCX3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Khdc4Q3TCX3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Khdc4Q3TCX3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Khdc4Q3TCX3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.31■■□□□ 1.32
Khdc4Q3TCX3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Khdc4Q3TCX3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Khdc4Q3TCX3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Khdc4Q3TCX3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Khdc4Q3TCX3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Khdc4Q3TCX3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Khdc4Q3TCX3 Gm6821-201ENSMUST00000107540 542 ntBASIC23.28■■□□□ 1.32
Khdc4Q3TCX3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Khdc4Q3TCX3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Khdc4Q3TCX3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Khdc4Q3TCX3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Khdc4Q3TCX3 Gm8503-201ENSMUST00000118131 455 ntBASIC23.26■■□□□ 1.31
Khdc4Q3TCX3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.26■■□□□ 1.31
Khdc4Q3TCX3 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.26■■□□□ 1.31
Khdc4Q3TCX3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Khdc4Q3TCX3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Khdc4Q3TCX3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Khdc4Q3TCX3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Khdc4Q3TCX3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Khdc4Q3TCX3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
Khdc4Q3TCX3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Khdc4Q3TCX3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Khdc4Q3TCX3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Khdc4Q3TCX3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Khdc4Q3TCX3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Khdc4Q3TCX3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.22■■□□□ 1.31
Khdc4Q3TCX3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.22■■□□□ 1.31
Khdc4Q3TCX3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Khdc4Q3TCX3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Khdc4Q3TCX3 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.19■■□□□ 1.3
Khdc4Q3TCX3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Khdc4Q3TCX3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Khdc4Q3TCX3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Khdc4Q3TCX3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Khdc4Q3TCX3 Zxda-201ENSMUST00000117281 2621 ntBASIC23.18■■□□□ 1.3
Khdc4Q3TCX3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Khdc4Q3TCX3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Khdc4Q3TCX3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Khdc4Q3TCX3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Khdc4Q3TCX3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Khdc4Q3TCX3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Khdc4Q3TCX3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Khdc4Q3TCX3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Khdc4Q3TCX3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Khdc4Q3TCX3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Khdc4Q3TCX3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Khdc4Q3TCX3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Khdc4Q3TCX3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.09■■□□□ 1.29
Khdc4Q3TCX3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.09■■□□□ 1.29
Khdc4Q3TCX3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Khdc4Q3TCX3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Khdc4Q3TCX3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.08■■□□□ 1.28
Khdc4Q3TCX3 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.07■■□□□ 1.28
Khdc4Q3TCX3 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.07■■□□□ 1.28
Khdc4Q3TCX3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Khdc4Q3TCX3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Khdc4Q3TCX3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Khdc4Q3TCX3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Khdc4Q3TCX3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Khdc4Q3TCX3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.05■■□□□ 1.28
Khdc4Q3TCX3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Khdc4Q3TCX3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Khdc4Q3TCX3 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.04■■□□□ 1.28
Khdc4Q3TCX3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.04■■□□□ 1.28
Khdc4Q3TCX3 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.03■■□□□ 1.28
Khdc4Q3TCX3 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.02■■□□□ 1.28
Khdc4Q3TCX3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Khdc4Q3TCX3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Khdc4Q3TCX3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Khdc4Q3TCX3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Khdc4Q3TCX3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Khdc4Q3TCX3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23■■□□□ 1.27
Khdc4Q3TCX3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms