Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrkdcP97313 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrkdcP97313 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
PrkdcP97313 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.98■□□□□ 0.47
PrkdcP97313 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrkdcP97313 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.97■□□□□ 0.47
PrkdcP97313 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PrkdcP97313 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PrkdcP97313 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.94■□□□□ 0.46
PrkdcP97313 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PrkdcP97313 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.93■□□□□ 0.46
PrkdcP97313 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PrkdcP97313 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PrkdcP97313 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PrkdcP97313 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PrkdcP97313 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
PrkdcP97313 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrkdcP97313 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.89■□□□□ 0.45
PrkdcP97313 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrkdcP97313 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrkdcP97313 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrkdcP97313 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PrkdcP97313 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrkdcP97313 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PrkdcP97313 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PrkdcP97313 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.86■□□□□ 0.45
PrkdcP97313 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.86■□□□□ 0.45
PrkdcP97313 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PrkdcP97313 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.83■□□□□ 0.45
PrkdcP97313 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.83■□□□□ 0.44
PrkdcP97313 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PrkdcP97313 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PrkdcP97313 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PrkdcP97313 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PrkdcP97313 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PrkdcP97313 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.81■□□□□ 0.44
PrkdcP97313 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PrkdcP97313 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.8■□□□□ 0.44
PrkdcP97313 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PrkdcP97313 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PrkdcP97313 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PrkdcP97313 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PrkdcP97313 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PrkdcP97313 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PrkdcP97313 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PrkdcP97313 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PrkdcP97313 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
PrkdcP97313 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PrkdcP97313 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PrkdcP97313 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PrkdcP97313 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PrkdcP97313 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PrkdcP97313 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.74■□□□□ 0.43
PrkdcP97313 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.73■□□□□ 0.43
PrkdcP97313 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PrkdcP97313 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PrkdcP97313 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PrkdcP97313 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PrkdcP97313 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PrkdcP97313 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PrkdcP97313 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PrkdcP97313 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PrkdcP97313 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PrkdcP97313 Gm6311-201ENSMUST00000073790 878 ntBASIC17.7■□□□□ 0.42
PrkdcP97313 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PrkdcP97313 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PrkdcP97313 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.7■□□□□ 0.42
PrkdcP97313 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PrkdcP97313 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PrkdcP97313 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PrkdcP97313 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PrkdcP97313 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PrkdcP97313 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrkdcP97313 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrkdcP97313 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrkdcP97313 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PrkdcP97313 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PrkdcP97313 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PrkdcP97313 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.66■□□□□ 0.42
PrkdcP97313 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PrkdcP97313 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.66■□□□□ 0.42
PrkdcP97313 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PrkdcP97313 Gm22567-201ENSMUST00000175542 342 ntBASIC17.65■□□□□ 0.42
PrkdcP97313 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PrkdcP97313 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PrkdcP97313 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.64■□□□□ 0.41
PrkdcP97313 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
PrkdcP97313 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PrkdcP97313 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PrkdcP97313 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.63■□□□□ 0.41
PrkdcP97313 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PrkdcP97313 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms