Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cpne2P59108 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cpne2P59108 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.47■□□□□ 0.87
Cpne2P59108 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpne2P59108 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne2P59108 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne2P59108 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne2P59108 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpne2P59108 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cpne2P59108 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpne2P59108 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpne2P59108 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpne2P59108 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne2P59108 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne2P59108 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne2P59108 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne2P59108 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne2P59108 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne2P59108 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne2P59108 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Cpne2P59108 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpne2P59108 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpne2P59108 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cpne2P59108 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne2P59108 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Cpne2P59108 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne2P59108 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne2P59108 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne2P59108 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne2P59108 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cpne2P59108 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cpne2P59108 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne2P59108 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne2P59108 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne2P59108 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne2P59108 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne2P59108 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.34■□□□□ 0.85
Cpne2P59108 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.33■□□□□ 0.85
Cpne2P59108 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cpne2P59108 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cpne2P59108 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne2P59108 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne2P59108 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.31■□□□□ 0.84
Cpne2P59108 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne2P59108 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne2P59108 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne2P59108 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.29■□□□□ 0.84
Cpne2P59108 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne2P59108 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne2P59108 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Cpne2P59108 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.27■□□□□ 0.83
Cpne2P59108 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.27■□□□□ 0.83
Cpne2P59108 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Cpne2P59108 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.25■□□□□ 0.83
Cpne2P59108 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne2P59108 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne2P59108 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne2P59108 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Cpne2P59108 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Cpne2P59108 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne2P59108 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne2P59108 Peli2-204ENSMUST00000226513 1320 ntBASIC20.24■□□□□ 0.83
Cpne2P59108 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne2P59108 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne2P59108 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cpne2P59108 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Cpne2P59108 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne2P59108 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne2P59108 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne2P59108 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne2P59108 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cpne2P59108 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cpne2P59108 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cpne2P59108 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cpne2P59108 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne2P59108 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cpne2P59108 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne2P59108 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cpne2P59108 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne2P59108 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne2P59108 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Cpne2P59108 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne2P59108 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne2P59108 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne2P59108 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.18■□□□□ 0.82
Cpne2P59108 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne2P59108 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne2P59108 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne2P59108 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne2P59108 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne2P59108 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne2P59108 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne2P59108 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cpne2P59108 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne2P59108 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne2P59108 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cpne2P59108 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne2P59108 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne2P59108 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne2P59108 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms