Protein–RNA interactions for Protein: P58283

Rnf216, E3 ubiquitin-protein ligase RNF216, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf216P58283 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Rnf216P58283 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rnf216P58283 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rnf216P58283 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rnf216P58283 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rnf216P58283 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Rnf216P58283 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rnf216P58283 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Rnf216P58283 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Rnf216P58283 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rnf216P58283 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rnf216P58283 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rnf216P58283 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rnf216P58283 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rnf216P58283 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.57■■■□□ 2.16
Rnf216P58283 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
Rnf216P58283 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rnf216P58283 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.55■■■□□ 2.16
Rnf216P58283 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.54■■■□□ 2.16
Rnf216P58283 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rnf216P58283 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rnf216P58283 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Rnf216P58283 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rnf216P58283 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
Rnf216P58283 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rnf216P58283 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rnf216P58283 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rnf216P58283 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Rnf216P58283 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rnf216P58283 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.45■■■□□ 2.15
Rnf216P58283 Gm8503-201ENSMUST00000118131 455 ntBASIC28.45■■■□□ 2.14
Rnf216P58283 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Rnf216P58283 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Rnf216P58283 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rnf216P58283 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rnf216P58283 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rnf216P58283 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rnf216P58283 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rnf216P58283 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rnf216P58283 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.41■■■□□ 2.14
Rnf216P58283 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rnf216P58283 Gm6821-201ENSMUST00000107540 542 ntBASIC28.4■■■□□ 2.14
Rnf216P58283 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Rnf216P58283 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.39■■■□□ 2.14
Rnf216P58283 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Rnf216P58283 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.39■■■□□ 2.14
Rnf216P58283 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
Rnf216P58283 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
Rnf216P58283 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rnf216P58283 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Rnf216P58283 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Rnf216P58283 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rnf216P58283 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rnf216P58283 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.34■■■□□ 2.13
Rnf216P58283 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
Rnf216P58283 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.31■■■□□ 2.12
Rnf216P58283 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rnf216P58283 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.3■■■□□ 2.12
Rnf216P58283 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Rnf216P58283 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rnf216P58283 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rnf216P58283 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.29■■■□□ 2.12
Rnf216P58283 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Rnf216P58283 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rnf216P58283 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Rnf216P58283 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
Rnf216P58283 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.25■■■□□ 2.11
Rnf216P58283 Nkain2-201ENSMUST00000092602 558 ntBASIC28.25■■■□□ 2.11
Rnf216P58283 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rnf216P58283 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.11
Rnf216P58283 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Rnf216P58283 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rnf216P58283 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
Rnf216P58283 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.22■■■□□ 2.11
Rnf216P58283 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rnf216P58283 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.21■■■□□ 2.11
Rnf216P58283 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Rnf216P58283 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rnf216P58283 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Rnf216P58283 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rnf216P58283 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rnf216P58283 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.17■■■□□ 2.1
Rnf216P58283 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rnf216P58283 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Rnf216P58283 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Rnf216P58283 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.14■■■□□ 2.1
Rnf216P58283 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Rnf216P58283 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rnf216P58283 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Rnf216P58283 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rnf216P58283 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Rnf216P58283 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rnf216P58283 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Rnf216P58283 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Rnf216P58283 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Rnf216P58283 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Rnf216P58283 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Rnf216P58283 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Rnf216P58283 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Rnf216P58283 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms