Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
Hmgcs2P54869 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Hmgcs2P54869 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
Hmgcs2P54869 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.44■■■□□ 2.14
Hmgcs2P54869 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.43■■■□□ 2.14
Hmgcs2P54869 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.43■■■□□ 2.14
Hmgcs2P54869 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Hmgcs2P54869 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Hmgcs2P54869 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.39■■■□□ 2.14
Hmgcs2P54869 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Hmgcs2P54869 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Hmgcs2P54869 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Hmgcs2P54869 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Hmgcs2P54869 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Hmgcs2P54869 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Hmgcs2P54869 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Hmgcs2P54869 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Hmgcs2P54869 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Hmgcs2P54869 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Hmgcs2P54869 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Hmgcs2P54869 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Hmgcs2P54869 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.32■■■□□ 2.12
Hmgcs2P54869 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Hmgcs2P54869 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Hmgcs2P54869 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Hmgcs2P54869 Nkain2-201ENSMUST00000092602 558 ntBASIC28.3■■■□□ 2.12
Hmgcs2P54869 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Hmgcs2P54869 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Hmgcs2P54869 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Hmgcs2P54869 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.27■■■□□ 2.12
Hmgcs2P54869 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
Hmgcs2P54869 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Hmgcs2P54869 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Hmgcs2P54869 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.25■■■□□ 2.11
Hmgcs2P54869 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Hmgcs2P54869 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Hmgcs2P54869 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.23■■■□□ 2.11
Hmgcs2P54869 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Hmgcs2P54869 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Hmgcs2P54869 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Hmgcs2P54869 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Hmgcs2P54869 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Hmgcs2P54869 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Hmgcs2P54869 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Hmgcs2P54869 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Hmgcs2P54869 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.17■■■□□ 2.1
Hmgcs2P54869 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Hmgcs2P54869 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Hmgcs2P54869 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
Hmgcs2P54869 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Hmgcs2P54869 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Hmgcs2P54869 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Hmgcs2P54869 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Hmgcs2P54869 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.15■■■□□ 2.1
Hmgcs2P54869 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Hmgcs2P54869 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Hmgcs2P54869 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Hmgcs2P54869 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Hmgcs2P54869 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Hmgcs2P54869 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.1■■■□□ 2.09
Hmgcs2P54869 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.08■■■□□ 2.09
Hmgcs2P54869 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Hmgcs2P54869 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Hmgcs2P54869 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.07■■■□□ 2.08
Hmgcs2P54869 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Hmgcs2P54869 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Hmgcs2P54869 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Hmgcs2P54869 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Hmgcs2P54869 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Hmgcs2P54869 Gm7432-201ENSMUST00000210343 879 ntBASIC28.01■■■□□ 2.07
Hmgcs2P54869 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28■■■□□ 2.07
Hmgcs2P54869 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
Hmgcs2P54869 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Hmgcs2P54869 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Hmgcs2P54869 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Hmgcs2P54869 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.96■■■□□ 2.07
Hmgcs2P54869 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.95■■■□□ 2.07
Hmgcs2P54869 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.95■■■□□ 2.06
Hmgcs2P54869 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Hmgcs2P54869 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Hmgcs2P54869 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Hmgcs2P54869 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
Hmgcs2P54869 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
Hmgcs2P54869 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Hmgcs2P54869 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Hmgcs2P54869 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Hmgcs2P54869 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Hmgcs2P54869 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Hmgcs2P54869 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Hmgcs2P54869 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Hmgcs2P54869 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Hmgcs2P54869 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.84■■■□□ 2.05
Hmgcs2P54869 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Hmgcs2P54869 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Hmgcs2P54869 Gm11599-201ENSMUST00000118720 878 ntBASIC27.82■■■□□ 2.04
Hmgcs2P54869 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.82■■■□□ 2.04
Hmgcs2P54869 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.82■■■□□ 2.04
Hmgcs2P54869 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
Hmgcs2P54869 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.81■■■□□ 2.04
Hmgcs2P54869 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms