Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Atp6v1aP50516 Nkain2-201ENSMUST00000092602 558 ntBASIC30.57■■■□□ 2.48
Atp6v1aP50516 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Atp6v1aP50516 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Atp6v1aP50516 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Atp6v1aP50516 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Atp6v1aP50516 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.53■■■□□ 2.48
Atp6v1aP50516 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.53■■■□□ 2.48
Atp6v1aP50516 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.52■■■□□ 2.48
Atp6v1aP50516 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
Atp6v1aP50516 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.52■■■□□ 2.48
Atp6v1aP50516 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Atp6v1aP50516 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Atp6v1aP50516 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Atp6v1aP50516 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Atp6v1aP50516 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
Atp6v1aP50516 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Atp6v1aP50516 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Atp6v1aP50516 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
Atp6v1aP50516 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Atp6v1aP50516 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Atp6v1aP50516 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Atp6v1aP50516 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Atp6v1aP50516 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Atp6v1aP50516 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Atp6v1aP50516 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Atp6v1aP50516 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Atp6v1aP50516 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Atp6v1aP50516 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.43■■■□□ 2.46
Atp6v1aP50516 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.43■■■□□ 2.46
Atp6v1aP50516 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Atp6v1aP50516 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Atp6v1aP50516 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Atp6v1aP50516 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.41■■■□□ 2.46
Atp6v1aP50516 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Atp6v1aP50516 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Atp6v1aP50516 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
Atp6v1aP50516 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Atp6v1aP50516 Gm7432-201ENSMUST00000210343 879 ntBASIC30.36■■■□□ 2.45
Atp6v1aP50516 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Atp6v1aP50516 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Atp6v1aP50516 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Atp6v1aP50516 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Atp6v1aP50516 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Atp6v1aP50516 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
Atp6v1aP50516 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Atp6v1aP50516 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.3■■■□□ 2.44
Atp6v1aP50516 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Atp6v1aP50516 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
Atp6v1aP50516 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Atp6v1aP50516 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Atp6v1aP50516 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Atp6v1aP50516 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.22■■■□□ 2.43
Atp6v1aP50516 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Atp6v1aP50516 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
Atp6v1aP50516 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.2■■■□□ 2.43
Atp6v1aP50516 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Atp6v1aP50516 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Atp6v1aP50516 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Atp6v1aP50516 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Atp6v1aP50516 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Atp6v1aP50516 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Atp6v1aP50516 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.17■■■□□ 2.42
Atp6v1aP50516 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.17■■■□□ 2.42
Atp6v1aP50516 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Atp6v1aP50516 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Atp6v1aP50516 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Atp6v1aP50516 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Atp6v1aP50516 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.14■■■□□ 2.42
Atp6v1aP50516 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Atp6v1aP50516 Gm11599-201ENSMUST00000118720 878 ntBASIC30.12■■■□□ 2.41
Atp6v1aP50516 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Atp6v1aP50516 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Atp6v1aP50516 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.1■■■□□ 2.41
Atp6v1aP50516 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
Atp6v1aP50516 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
Atp6v1aP50516 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.08■■■□□ 2.41
Atp6v1aP50516 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.08■■■□□ 2.41
Atp6v1aP50516 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Atp6v1aP50516 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Atp6v1aP50516 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.05■■■□□ 2.4
Atp6v1aP50516 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.03■■■□□ 2.4
Atp6v1aP50516 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Atp6v1aP50516 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Atp6v1aP50516 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Atp6v1aP50516 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Atp6v1aP50516 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30■■■□□ 2.39
Atp6v1aP50516 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.99■■■□□ 2.39
Atp6v1aP50516 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Atp6v1aP50516 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.97■■■□□ 2.39
Atp6v1aP50516 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.96■■■□□ 2.39
Atp6v1aP50516 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Atp6v1aP50516 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.94■■■□□ 2.38
Atp6v1aP50516 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Atp6v1aP50516 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Atp6v1aP50516 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.93■■■□□ 2.38
Atp6v1aP50516 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Atp6v1aP50516 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Atp6v1aP50516 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Atp6v1aP50516 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.92■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms