Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Slc6a13P31649 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.44■■□□□ 1.66
Slc6a13P31649 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.44■■□□□ 1.66
Slc6a13P31649 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Slc6a13P31649 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Slc6a13P31649 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.4■■□□□ 1.66
Slc6a13P31649 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Slc6a13P31649 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.4■■□□□ 1.66
Slc6a13P31649 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Slc6a13P31649 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Slc6a13P31649 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Slc6a13P31649 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Slc6a13P31649 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Slc6a13P31649 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Slc6a13P31649 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.35■■□□□ 1.65
Slc6a13P31649 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.35■■□□□ 1.65
Slc6a13P31649 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Slc6a13P31649 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Slc6a13P31649 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.33■■□□□ 1.65
Slc6a13P31649 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Slc6a13P31649 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.32■■□□□ 1.64
Slc6a13P31649 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.31■■□□□ 1.64
Slc6a13P31649 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Slc6a13P31649 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Slc6a13P31649 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Slc6a13P31649 Gm9397-201ENSMUST00000200125 605 ntBASIC25.3■■□□□ 1.64
Slc6a13P31649 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Slc6a13P31649 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slc6a13P31649 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Slc6a13P31649 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.29■■□□□ 1.64
Slc6a13P31649 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Slc6a13P31649 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Slc6a13P31649 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Slc6a13P31649 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.28■■□□□ 1.64
Slc6a13P31649 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Slc6a13P31649 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.26■■□□□ 1.63
Slc6a13P31649 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.26■■□□□ 1.63
Slc6a13P31649 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Slc6a13P31649 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Slc6a13P31649 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Slc6a13P31649 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
Slc6a13P31649 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Slc6a13P31649 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Slc6a13P31649 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Slc6a13P31649 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.21■■□□□ 1.63
Slc6a13P31649 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
Slc6a13P31649 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Slc6a13P31649 Gm45855-201ENSMUST00000212546 880 ntBASIC25.2■■□□□ 1.62
Slc6a13P31649 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Slc6a13P31649 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.19■■□□□ 1.62
Slc6a13P31649 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.19■■□□□ 1.62
Slc6a13P31649 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Slc6a13P31649 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.17■■□□□ 1.62
Slc6a13P31649 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Slc6a13P31649 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.16■■□□□ 1.62
Slc6a13P31649 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Slc6a13P31649 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Slc6a13P31649 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
Slc6a13P31649 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.15■■□□□ 1.62
Slc6a13P31649 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Slc6a13P31649 Amer2-203ENSMUST00000225247 2662 ntBASIC25.15■■□□□ 1.62
Slc6a13P31649 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Slc6a13P31649 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.14■■□□□ 1.61
Slc6a13P31649 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.13■■□□□ 1.61
Slc6a13P31649 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Slc6a13P31649 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Slc6a13P31649 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Slc6a13P31649 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Slc6a13P31649 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Slc6a13P31649 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Slc6a13P31649 Gm24970-201ENSMUST00000175582 82 ntBASIC25.1■■□□□ 1.61
Slc6a13P31649 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Slc6a13P31649 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.09■■□□□ 1.61
Slc6a13P31649 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Slc6a13P31649 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Slc6a13P31649 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Slc6a13P31649 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.07■■□□□ 1.6
Slc6a13P31649 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Slc6a13P31649 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Slc6a13P31649 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Slc6a13P31649 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Slc6a13P31649 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Slc6a13P31649 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Slc6a13P31649 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Slc6a13P31649 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.05■■□□□ 1.6
Slc6a13P31649 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
Slc6a13P31649 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
Slc6a13P31649 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Slc6a13P31649 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Slc6a13P31649 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Slc6a13P31649 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Slc6a13P31649 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Slc6a13P31649 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.02■■□□□ 1.6
Slc6a13P31649 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Slc6a13P31649 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Slc6a13P31649 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.01■■□□□ 1.59
Slc6a13P31649 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Slc6a13P31649 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Slc6a13P31649 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Slc6a13P31649 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms