Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.12■□□□□ 0.81
Fn1P11276 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fn1P11276 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.1■□□□□ 0.81
Fn1P11276 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Fn1P11276 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fn1P11276 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Fn1P11276 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fn1P11276 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Fn1P11276 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.04■□□□□ 0.8
Fn1P11276 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Fn1P11276 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fn1P11276 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Fn1P11276 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20■□□□□ 0.79
Fn1P11276 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fn1P11276 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fn1P11276 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Fn1P11276 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fn1P11276 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
Fn1P11276 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Fn1P11276 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.98■□□□□ 0.79
Fn1P11276 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fn1P11276 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fn1P11276 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.98■□□□□ 0.79
Fn1P11276 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Fn1P11276 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fn1P11276 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
Fn1P11276 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fn1P11276 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Fn1P11276 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fn1P11276 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Fn1P11276 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.93■□□□□ 0.78
Fn1P11276 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Fn1P11276 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fn1P11276 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.93■□□□□ 0.78
Fn1P11276 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.93■□□□□ 0.78
Fn1P11276 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Fn1P11276 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fn1P11276 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Fn1P11276 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fn1P11276 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fn1P11276 Gm6311-201ENSMUST00000073790 878 ntBASIC19.91■□□□□ 0.78
Fn1P11276 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.91■□□□□ 0.78
Fn1P11276 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fn1P11276 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Fn1P11276 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.89■□□□□ 0.77
Fn1P11276 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fn1P11276 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Fn1P11276 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.85■□□□□ 0.77
Fn1P11276 Gm22567-201ENSMUST00000175542 342 ntBASIC19.85■□□□□ 0.77
Fn1P11276 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Fn1P11276 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.85■□□□□ 0.77
Fn1P11276 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fn1P11276 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.85■□□□□ 0.77
Fn1P11276 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Fn1P11276 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Fn1P11276 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fn1P11276 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Fn1P11276 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Fn1P11276 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Fn1P11276 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Fn1P11276 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Fn1P11276 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Fn1P11276 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.81■□□□□ 0.76
Fn1P11276 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Fn1P11276 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Fn1P11276 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Fn1P11276 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Fn1P11276 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fn1P11276 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fn1P11276 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Fn1P11276 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Fn1P11276 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fn1P11276 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Fn1P11276 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.77■□□□□ 0.76
Fn1P11276 Gm12366-201ENSMUST00000121722 873 ntBASIC19.77■□□□□ 0.76
Fn1P11276 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.77■□□□□ 0.76
Fn1P11276 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.77■□□□□ 0.76
Fn1P11276 Gm5786-201ENSMUST00000085368 882 ntBASIC19.77■□□□□ 0.76
Fn1P11276 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.76■□□□□ 0.75
Fn1P11276 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fn1P11276 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fn1P11276 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Fn1P11276 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fn1P11276 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.75■□□□□ 0.75
Fn1P11276 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Fn1P11276 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Fn1P11276 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Fn1P11276 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fn1P11276 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Fn1P11276 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fn1P11276 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fn1P11276 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fn1P11276 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fn1P11276 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fn1P11276 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Fn1P11276 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fn1P11276 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Fn1P11276 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fn1P11276 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fn1P11276 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms