Protein–RNA interactions for Protein: P0DN34

Ndufb1, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb1P0DN34 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndufb1P0DN34 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndufb1P0DN34 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndufb1P0DN34 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ndufb1P0DN34 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndufb1P0DN34 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndufb1P0DN34 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndufb1P0DN34 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndufb1P0DN34 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ndufb1P0DN34 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.12□□□□□ -0.15
Ndufb1P0DN34 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ndufb1P0DN34 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndufb1P0DN34 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ndufb1P0DN34 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ndufb1P0DN34 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ndufb1P0DN34 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndufb1P0DN34 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndufb1P0DN34 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC14.09□□□□□ -0.15
Ndufb1P0DN34 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndufb1P0DN34 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ndufb1P0DN34 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC14.07□□□□□ -0.16
Ndufb1P0DN34 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
Ndufb1P0DN34 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndufb1P0DN34 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndufb1P0DN34 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndufb1P0DN34 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndufb1P0DN34 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC14.06□□□□□ -0.16
Ndufb1P0DN34 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ndufb1P0DN34 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ndufb1P0DN34 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndufb1P0DN34 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndufb1P0DN34 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndufb1P0DN34 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndufb1P0DN34 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndufb1P0DN34 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ndufb1P0DN34 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ndufb1P0DN34 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndufb1P0DN34 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ndufb1P0DN34 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndufb1P0DN34 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ndufb1P0DN34 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufb1P0DN34 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufb1P0DN34 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufb1P0DN34 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufb1P0DN34 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Ndufb1P0DN34 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufb1P0DN34 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufb1P0DN34 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufb1P0DN34 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufb1P0DN34 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufb1P0DN34 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ndufb1P0DN34 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufb1P0DN34 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufb1P0DN34 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufb1P0DN34 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufb1P0DN34 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufb1P0DN34 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ndufb1P0DN34 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufb1P0DN34 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ndufb1P0DN34 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ndufb1P0DN34 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ndufb1P0DN34 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Ndufb1P0DN34 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndufb1P0DN34 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ndufb1P0DN34 Gm6658-202ENSMUST00000209493 1885 ntBASIC13.95□□□□□ -0.18
Ndufb1P0DN34 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndufb1P0DN34 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ndufb1P0DN34 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ndufb1P0DN34 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ndufb1P0DN34 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ndufb1P0DN34 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ndufb1P0DN34 Fezf2-202ENSMUST00000224023 1917 ntBASIC13.92□□□□□ -0.18
Ndufb1P0DN34 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ndufb1P0DN34 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ndufb1P0DN34 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndufb1P0DN34 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndufb1P0DN34 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndufb1P0DN34 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ndufb1P0DN34 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndufb1P0DN34 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ndufb1P0DN34 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndufb1P0DN34 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ndufb1P0DN34 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC13.91□□□□□ -0.18
Ndufb1P0DN34 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ndufb1P0DN34 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ndufb1P0DN34 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ndufb1P0DN34 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ndufb1P0DN34 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC13.9□□□□□ -0.18
Ndufb1P0DN34 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ndufb1P0DN34 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC13.89□□□□□ -0.19
Ndufb1P0DN34 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndufb1P0DN34 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ndufb1P0DN34 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ndufb1P0DN34 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ndufb1P0DN34 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ndufb1P0DN34 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ndufb1P0DN34 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ndufb1P0DN34 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ndufb1P0DN34 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndufb1P0DN34 Gm43445-201ENSMUST00000198564 2091 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms