Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Hoxa6P09092 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxa6P09092 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Hoxa6P09092 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxa6P09092 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxa6P09092 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hoxa6P09092 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hoxa6P09092 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.39■■□□□ 1.01
Hoxa6P09092 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Hoxa6P09092 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxa6P09092 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxa6P09092 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Hoxa6P09092 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxa6P09092 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxa6P09092 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxa6P09092 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxa6P09092 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hoxa6P09092 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxa6P09092 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hoxa6P09092 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Hoxa6P09092 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.33■■□□□ 1.01
Hoxa6P09092 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Hoxa6P09092 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxa6P09092 Gm8503-201ENSMUST00000118131 455 ntBASIC21.3■■□□□ 1
Hoxa6P09092 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Hoxa6P09092 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.29■■□□□ 1
Hoxa6P09092 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hoxa6P09092 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hoxa6P09092 Zxda-201ENSMUST00000117281 2621 ntBASIC21.27■■□□□ 1
Hoxa6P09092 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hoxa6P09092 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxa6P09092 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.26■□□□□ 0.99
Hoxa6P09092 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxa6P09092 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxa6P09092 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxa6P09092 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.25■□□□□ 0.99
Hoxa6P09092 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.23■□□□□ 0.99
Hoxa6P09092 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxa6P09092 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.22■□□□□ 0.99
Hoxa6P09092 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxa6P09092 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxa6P09092 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa6P09092 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa6P09092 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Hoxa6P09092 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa6P09092 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxa6P09092 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxa6P09092 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Hoxa6P09092 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxa6P09092 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxa6P09092 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxa6P09092 Gm6821-201ENSMUST00000107540 542 ntBASIC21.17■□□□□ 0.98
Hoxa6P09092 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.17■□□□□ 0.98
Hoxa6P09092 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxa6P09092 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxa6P09092 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxa6P09092 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa6P09092 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa6P09092 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa6P09092 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Hoxa6P09092 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxa6P09092 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxa6P09092 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxa6P09092 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxa6P09092 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxa6P09092 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.13■□□□□ 0.97
Hoxa6P09092 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.13■□□□□ 0.97
Hoxa6P09092 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxa6P09092 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.12■□□□□ 0.97
Hoxa6P09092 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Hoxa6P09092 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxa6P09092 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxa6P09092 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxa6P09092 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxa6P09092 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.1■□□□□ 0.97
Hoxa6P09092 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Hoxa6P09092 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxa6P09092 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.09■□□□□ 0.97
Hoxa6P09092 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxa6P09092 Nkain2-201ENSMUST00000092602 558 ntBASIC21.09■□□□□ 0.97
Hoxa6P09092 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxa6P09092 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hoxa6P09092 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxa6P09092 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Hoxa6P09092 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxa6P09092 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxa6P09092 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxa6P09092 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxa6P09092 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxa6P09092 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Hoxa6P09092 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxa6P09092 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.03■□□□□ 0.96
Hoxa6P09092 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.02■□□□□ 0.96
Hoxa6P09092 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxa6P09092 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxa6P09092 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxa6P09092 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxa6P09092 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
Hoxa6P09092 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hoxa6P09092 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms