Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.41■■□□□ 1.98
IkbkbO88351 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
IkbkbO88351 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
IkbkbO88351 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
IkbkbO88351 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
IkbkbO88351 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
IkbkbO88351 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
IkbkbO88351 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
IkbkbO88351 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
IkbkbO88351 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.36■■□□□ 1.97
IkbkbO88351 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.36■■□□□ 1.97
IkbkbO88351 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
IkbkbO88351 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
IkbkbO88351 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
IkbkbO88351 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
IkbkbO88351 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
IkbkbO88351 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
IkbkbO88351 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
IkbkbO88351 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
IkbkbO88351 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
IkbkbO88351 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
IkbkbO88351 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.32■■□□□ 1.96
IkbkbO88351 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
IkbkbO88351 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
IkbkbO88351 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
IkbkbO88351 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
IkbkbO88351 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
IkbkbO88351 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
IkbkbO88351 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
IkbkbO88351 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.26■■□□□ 1.95
IkbkbO88351 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.26■■□□□ 1.95
IkbkbO88351 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
IkbkbO88351 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.24■■□□□ 1.95
IkbkbO88351 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
IkbkbO88351 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
IkbkbO88351 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
IkbkbO88351 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
IkbkbO88351 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
IkbkbO88351 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
IkbkbO88351 Gm24970-201ENSMUST00000175582 82 ntBASIC27.21■■□□□ 1.95
IkbkbO88351 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.2■■□□□ 1.94
IkbkbO88351 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
IkbkbO88351 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
IkbkbO88351 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.18■■□□□ 1.94
IkbkbO88351 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
IkbkbO88351 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
IkbkbO88351 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
IkbkbO88351 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.17■■□□□ 1.94
IkbkbO88351 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
IkbkbO88351 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
IkbkbO88351 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
IkbkbO88351 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
IkbkbO88351 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
IkbkbO88351 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
IkbkbO88351 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
IkbkbO88351 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
IkbkbO88351 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
IkbkbO88351 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.13■■□□□ 1.93
IkbkbO88351 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
IkbkbO88351 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
IkbkbO88351 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
IkbkbO88351 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
IkbkbO88351 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
IkbkbO88351 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
IkbkbO88351 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
IkbkbO88351 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
IkbkbO88351 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.11■■□□□ 1.93
IkbkbO88351 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
IkbkbO88351 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.09■■□□□ 1.93
IkbkbO88351 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
IkbkbO88351 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.09■■□□□ 1.93
IkbkbO88351 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.09■■□□□ 1.93
IkbkbO88351 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
IkbkbO88351 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
IkbkbO88351 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
IkbkbO88351 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
IkbkbO88351 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.07■■□□□ 1.92
IkbkbO88351 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
IkbkbO88351 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.06■■□□□ 1.92
IkbkbO88351 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.05■■□□□ 1.92
IkbkbO88351 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.05■■□□□ 1.92
IkbkbO88351 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
IkbkbO88351 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
IkbkbO88351 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
IkbkbO88351 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
IkbkbO88351 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
IkbkbO88351 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
IkbkbO88351 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
IkbkbO88351 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
IkbkbO88351 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
IkbkbO88351 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
IkbkbO88351 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.01■■□□□ 1.91
IkbkbO88351 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27■■□□□ 1.91
IkbkbO88351 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27■■□□□ 1.91
IkbkbO88351 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
IkbkbO88351 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
IkbkbO88351 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
IkbkbO88351 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
IkbkbO88351 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
IkbkbO88351 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms