Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cfdp1O88271 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.3■■■□□ 2.6
Cfdp1O88271 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Cfdp1O88271 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cfdp1O88271 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cfdp1O88271 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.29■■■□□ 2.6
Cfdp1O88271 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cfdp1O88271 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cfdp1O88271 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cfdp1O88271 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cfdp1O88271 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
Cfdp1O88271 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Cfdp1O88271 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Cfdp1O88271 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Cfdp1O88271 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.24■■■□□ 2.59
Cfdp1O88271 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cfdp1O88271 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Cfdp1O88271 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.23■■■□□ 2.59
Cfdp1O88271 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cfdp1O88271 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Cfdp1O88271 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Cfdp1O88271 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Cfdp1O88271 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Cfdp1O88271 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.2■■■□□ 2.59
Cfdp1O88271 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.19■■■□□ 2.58
Cfdp1O88271 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cfdp1O88271 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cfdp1O88271 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Cfdp1O88271 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Cfdp1O88271 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cfdp1O88271 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cfdp1O88271 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cfdp1O88271 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cfdp1O88271 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cfdp1O88271 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Cfdp1O88271 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Cfdp1O88271 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.14■■■□□ 2.58
Cfdp1O88271 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Cfdp1O88271 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Cfdp1O88271 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cfdp1O88271 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Cfdp1O88271 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Cfdp1O88271 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.09■■■□□ 2.57
Cfdp1O88271 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Cfdp1O88271 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Cfdp1O88271 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cfdp1O88271 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.06■■■□□ 2.56
Cfdp1O88271 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Cfdp1O88271 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Cfdp1O88271 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Cfdp1O88271 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cfdp1O88271 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.98■■■□□ 2.55
Cfdp1O88271 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cfdp1O88271 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Cfdp1O88271 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.96■■■□□ 2.55
Cfdp1O88271 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.96■■■□□ 2.55
Cfdp1O88271 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Cfdp1O88271 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.54
Cfdp1O88271 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Cfdp1O88271 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
Cfdp1O88271 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Cfdp1O88271 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Cfdp1O88271 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
Cfdp1O88271 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Cfdp1O88271 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.89■■■□□ 2.54
Cfdp1O88271 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.88■■■□□ 2.53
Cfdp1O88271 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cfdp1O88271 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Cfdp1O88271 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Cfdp1O88271 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Cfdp1O88271 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Cfdp1O88271 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Cfdp1O88271 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.82■■■□□ 2.52
Cfdp1O88271 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Cfdp1O88271 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Cfdp1O88271 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Cfdp1O88271 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Cfdp1O88271 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Cfdp1O88271 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Cfdp1O88271 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Cfdp1O88271 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Cfdp1O88271 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Cfdp1O88271 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Cfdp1O88271 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.77■■■□□ 2.52
Cfdp1O88271 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
Cfdp1O88271 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Cfdp1O88271 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Cfdp1O88271 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cfdp1O88271 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cfdp1O88271 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
Cfdp1O88271 Zxda-201ENSMUST00000117281 2621 ntBASIC30.72■■■□□ 2.51
Cfdp1O88271 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Cfdp1O88271 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Cfdp1O88271 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.7■■■□□ 2.51
Cfdp1O88271 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cfdp1O88271 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Cfdp1O88271 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.68■■■□□ 2.5
Cfdp1O88271 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.68■■■□□ 2.5
Cfdp1O88271 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.68■■■□□ 2.5
Cfdp1O88271 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms