Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm10226O88253 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm10226O88253 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Gm10226O88253 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Gm10226O88253 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm10226O88253 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm10226O88253 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Gm10226O88253 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm10226O88253 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm10226O88253 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.46■□□□□ 0.71
Gm10226O88253 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm10226O88253 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm10226O88253 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm10226O88253 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm10226O88253 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.43■□□□□ 0.7
Gm10226O88253 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Gm10226O88253 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.42■□□□□ 0.7
Gm10226O88253 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.41■□□□□ 0.7
Gm10226O88253 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm10226O88253 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm10226O88253 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm10226O88253 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm10226O88253 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm10226O88253 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm10226O88253 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm10226O88253 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm10226O88253 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm10226O88253 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm10226O88253 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm10226O88253 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm10226O88253 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm10226O88253 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm10226O88253 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm10226O88253 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.35■□□□□ 0.69
Gm10226O88253 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Gm10226O88253 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm10226O88253 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm10226O88253 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm10226O88253 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm10226O88253 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm10226O88253 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm10226O88253 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gm10226O88253 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm10226O88253 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm10226O88253 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.31■□□□□ 0.68
Gm10226O88253 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.29■□□□□ 0.68
Gm10226O88253 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm10226O88253 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Gm10226O88253 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm10226O88253 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm10226O88253 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm10226O88253 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Gm10226O88253 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm10226O88253 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm10226O88253 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm10226O88253 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm10226O88253 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.25■□□□□ 0.67
Gm10226O88253 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm10226O88253 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm10226O88253 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm10226O88253 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm10226O88253 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm10226O88253 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm10226O88253 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm10226O88253 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm10226O88253 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.21■□□□□ 0.67
Gm10226O88253 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10226O88253 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm10226O88253 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm10226O88253 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm10226O88253 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Gm10226O88253 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm10226O88253 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm10226O88253 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm10226O88253 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.16■□□□□ 0.66
Gm10226O88253 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm10226O88253 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Gm10226O88253 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm10226O88253 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.14■□□□□ 0.65
Gm10226O88253 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm10226O88253 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm10226O88253 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm10226O88253 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gm10226O88253 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm10226O88253 Zxda-201ENSMUST00000117281 2621 ntBASIC19.12■□□□□ 0.65
Gm10226O88253 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm10226O88253 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm10226O88253 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm10226O88253 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm10226O88253 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.11■□□□□ 0.65
Gm10226O88253 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm10226O88253 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm10226O88253 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.09■□□□□ 0.65
Gm10226O88253 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.09■□□□□ 0.65
Gm10226O88253 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm10226O88253 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm10226O88253 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm10226O88253 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gm10226O88253 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Gm10226O88253 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms