Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Abca4O35600 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Abca4O35600 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.57■■□□□ 1.52
Abca4O35600 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.55■■□□□ 1.52
Abca4O35600 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Abca4O35600 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Abca4O35600 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Abca4O35600 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Abca4O35600 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Abca4O35600 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Abca4O35600 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Abca4O35600 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Abca4O35600 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Abca4O35600 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.5■■□□□ 1.51
Abca4O35600 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.5■■□□□ 1.51
Abca4O35600 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.5■■□□□ 1.51
Abca4O35600 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.49■■□□□ 1.51
Abca4O35600 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Abca4O35600 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.47■■□□□ 1.51
Abca4O35600 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.46■■□□□ 1.51
Abca4O35600 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Abca4O35600 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.45■■□□□ 1.5
Abca4O35600 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Abca4O35600 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Abca4O35600 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Abca4O35600 Gm6311-201ENSMUST00000073790 878 ntBASIC24.43■■□□□ 1.5
Abca4O35600 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Abca4O35600 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Abca4O35600 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Abca4O35600 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Abca4O35600 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Abca4O35600 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.4■■□□□ 1.5
Abca4O35600 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Abca4O35600 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.39■■□□□ 1.49
Abca4O35600 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.39■■□□□ 1.49
Abca4O35600 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.38■■□□□ 1.49
Abca4O35600 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Abca4O35600 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Abca4O35600 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Abca4O35600 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Abca4O35600 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Abca4O35600 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.35■■□□□ 1.49
Abca4O35600 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Abca4O35600 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Abca4O35600 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.32■■□□□ 1.48
Abca4O35600 Gm12366-201ENSMUST00000121722 873 ntBASIC24.32■■□□□ 1.48
Abca4O35600 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.32■■□□□ 1.48
Abca4O35600 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.32■■□□□ 1.48
Abca4O35600 Gm5786-201ENSMUST00000085368 882 ntBASIC24.32■■□□□ 1.48
Abca4O35600 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Abca4O35600 Gm22567-201ENSMUST00000175542 342 ntBASIC24.32■■□□□ 1.48
Abca4O35600 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.31■■□□□ 1.48
Abca4O35600 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Abca4O35600 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
Abca4O35600 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Abca4O35600 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Abca4O35600 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Abca4O35600 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Abca4O35600 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
Abca4O35600 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Abca4O35600 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.24■■□□□ 1.47
Abca4O35600 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Abca4O35600 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Abca4O35600 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Abca4O35600 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Abca4O35600 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Abca4O35600 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Abca4O35600 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Abca4O35600 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Abca4O35600 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Abca4O35600 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Abca4O35600 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.18■■□□□ 1.46
Abca4O35600 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Abca4O35600 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Abca4O35600 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Abca4O35600 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Abca4O35600 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.17■■□□□ 1.46
Abca4O35600 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.17■■□□□ 1.46
Abca4O35600 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Abca4O35600 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Abca4O35600 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.16■■□□□ 1.46
Abca4O35600 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Abca4O35600 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Abca4O35600 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Abca4O35600 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Abca4O35600 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Abca4O35600 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Abca4O35600 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Abca4O35600 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Abca4O35600 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.15■■□□□ 1.46
Abca4O35600 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Abca4O35600 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Abca4O35600 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Abca4O35600 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Abca4O35600 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Abca4O35600 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Abca4O35600 Gm5812-201ENSMUST00000061073 957 ntBASIC24.11■■□□□ 1.45
Abca4O35600 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.11■■□□□ 1.45
Abca4O35600 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.1■■□□□ 1.45
Abca4O35600 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms