Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC33.16■■■□□ 2.9
Col15a1O35206 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC33.16■■■□□ 2.9
Col15a1O35206 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Col15a1O35206 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC33.16■■■□□ 2.9
Col15a1O35206 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC33.16■■■□□ 2.9
Col15a1O35206 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Col15a1O35206 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Col15a1O35206 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Col15a1O35206 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Col15a1O35206 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC33.09■■■□□ 2.89
Col15a1O35206 Gm2415-204ENSMUST00000190235 2004 ntBASIC33.09■■■□□ 2.89
Col15a1O35206 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC33.08■■■□□ 2.89
Col15a1O35206 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Col15a1O35206 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
Col15a1O35206 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Col15a1O35206 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Col15a1O35206 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Col15a1O35206 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC33.03■■■□□ 2.88
Col15a1O35206 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Col15a1O35206 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.88
Col15a1O35206 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
Col15a1O35206 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Col15a1O35206 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
Col15a1O35206 Nkain2-201ENSMUST00000092602 558 ntBASIC33■■■□□ 2.87
Col15a1O35206 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
Col15a1O35206 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Col15a1O35206 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
Col15a1O35206 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC32.98■■■□□ 2.87
Col15a1O35206 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC32.94■■■□□ 2.86
Col15a1O35206 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Col15a1O35206 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Col15a1O35206 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Col15a1O35206 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC32.92■■■□□ 2.86
Col15a1O35206 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC32.92■■■□□ 2.86
Col15a1O35206 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Col15a1O35206 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Col15a1O35206 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Col15a1O35206 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Col15a1O35206 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC32.89■■■□□ 2.86
Col15a1O35206 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Col15a1O35206 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Col15a1O35206 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Col15a1O35206 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Col15a1O35206 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Col15a1O35206 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Col15a1O35206 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC32.83■■■□□ 2.85
Col15a1O35206 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
Col15a1O35206 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Col15a1O35206 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Col15a1O35206 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC32.8■■■□□ 2.84
Col15a1O35206 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Col15a1O35206 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
Col15a1O35206 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.77■■■□□ 2.84
Col15a1O35206 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Col15a1O35206 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC32.76■■■□□ 2.84
Col15a1O35206 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Col15a1O35206 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Col15a1O35206 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
Col15a1O35206 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Col15a1O35206 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC32.73■■■□□ 2.83
Col15a1O35206 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Col15a1O35206 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Col15a1O35206 Gm7432-201ENSMUST00000210343 879 ntBASIC32.7■■■□□ 2.82
Col15a1O35206 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Col15a1O35206 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Col15a1O35206 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Col15a1O35206 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Col15a1O35206 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC32.66■■■□□ 2.82
Col15a1O35206 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Col15a1O35206 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Col15a1O35206 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC32.65■■■□□ 2.82
Col15a1O35206 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Col15a1O35206 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
Col15a1O35206 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Col15a1O35206 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Col15a1O35206 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Col15a1O35206 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC32.58■■■□□ 2.81
Col15a1O35206 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Col15a1O35206 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC32.57■■■□□ 2.8
Col15a1O35206 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
Col15a1O35206 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Col15a1O35206 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Col15a1O35206 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC32.55■■■□□ 2.8
Col15a1O35206 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Col15a1O35206 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Col15a1O35206 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Col15a1O35206 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Col15a1O35206 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
Col15a1O35206 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC32.49■■■□□ 2.79
Col15a1O35206 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Col15a1O35206 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC32.48■■■□□ 2.79
Col15a1O35206 Gm11599-201ENSMUST00000118720 878 ntBASIC32.47■■■□□ 2.79
Col15a1O35206 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC32.47■■■□□ 2.79
Col15a1O35206 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Col15a1O35206 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Col15a1O35206 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC32.45■■■□□ 2.79
Col15a1O35206 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC32.45■■■□□ 2.78
Col15a1O35206 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC32.45■■■□□ 2.78
Col15a1O35206 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Col15a1O35206 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC32.42■■■□□ 2.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms