Protein–RNA interactions for Protein: J3QQ59

Gm3383, Predicted gene 3194, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3383J3QQ59 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.48■■□□□ 1.99
Gm3383J3QQ59 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Gm3383J3QQ59 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Gm3383J3QQ59 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Gm3383J3QQ59 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Gm3383J3QQ59 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Gm3383J3QQ59 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Gm3383J3QQ59 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.42■■□□□ 1.98
Gm3383J3QQ59 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Gm3383J3QQ59 Nkain2-201ENSMUST00000092602 558 ntBASIC27.41■■□□□ 1.98
Gm3383J3QQ59 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Gm3383J3QQ59 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Gm3383J3QQ59 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.38■■□□□ 1.97
Gm3383J3QQ59 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Gm3383J3QQ59 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Gm3383J3QQ59 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Gm3383J3QQ59 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.36■■□□□ 1.97
Gm3383J3QQ59 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Gm3383J3QQ59 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Gm3383J3QQ59 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Gm3383J3QQ59 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Gm3383J3QQ59 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
Gm3383J3QQ59 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.34■■□□□ 1.97
Gm3383J3QQ59 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
Gm3383J3QQ59 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Gm3383J3QQ59 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.33■■□□□ 1.97
Gm3383J3QQ59 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Gm3383J3QQ59 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Gm3383J3QQ59 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Gm3383J3QQ59 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Gm3383J3QQ59 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Gm3383J3QQ59 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Gm3383J3QQ59 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Gm3383J3QQ59 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Gm3383J3QQ59 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Gm3383J3QQ59 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Gm3383J3QQ59 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Gm3383J3QQ59 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.25■■□□□ 1.95
Gm3383J3QQ59 Gm7432-201ENSMUST00000210343 879 ntBASIC27.25■■□□□ 1.95
Gm3383J3QQ59 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Gm3383J3QQ59 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Gm3383J3QQ59 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Gm3383J3QQ59 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Gm3383J3QQ59 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Gm3383J3QQ59 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Gm3383J3QQ59 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.21■■□□□ 1.95
Gm3383J3QQ59 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
Gm3383J3QQ59 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Gm3383J3QQ59 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.2■■□□□ 1.94
Gm3383J3QQ59 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Gm3383J3QQ59 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Gm3383J3QQ59 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Gm3383J3QQ59 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.16■■□□□ 1.94
Gm3383J3QQ59 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Gm3383J3QQ59 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Gm3383J3QQ59 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Gm3383J3QQ59 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Gm3383J3QQ59 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.14■■□□□ 1.94
Gm3383J3QQ59 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Gm3383J3QQ59 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.13■■□□□ 1.93
Gm3383J3QQ59 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
Gm3383J3QQ59 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Gm3383J3QQ59 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Gm3383J3QQ59 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Gm3383J3QQ59 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Gm3383J3QQ59 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Gm3383J3QQ59 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Gm3383J3QQ59 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Gm3383J3QQ59 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.07■■□□□ 1.92
Gm3383J3QQ59 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Gm3383J3QQ59 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Gm3383J3QQ59 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Gm3383J3QQ59 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Gm3383J3QQ59 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.03■■□□□ 1.92
Gm3383J3QQ59 Gm11599-201ENSMUST00000118720 878 ntBASIC27.02■■□□□ 1.92
Gm3383J3QQ59 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
Gm3383J3QQ59 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.02■■□□□ 1.92
Gm3383J3QQ59 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Gm3383J3QQ59 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27■■□□□ 1.91
Gm3383J3QQ59 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27■■□□□ 1.91
Gm3383J3QQ59 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27■■□□□ 1.91
Gm3383J3QQ59 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Gm3383J3QQ59 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Gm3383J3QQ59 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.97■■□□□ 1.91
Gm3383J3QQ59 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
Gm3383J3QQ59 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.96■■□□□ 1.91
Gm3383J3QQ59 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Gm3383J3QQ59 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Gm3383J3QQ59 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Gm3383J3QQ59 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Gm3383J3QQ59 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.9■■□□□ 1.9
Gm3383J3QQ59 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Gm3383J3QQ59 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.89■■□□□ 1.9
Gm3383J3QQ59 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Gm3383J3QQ59 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.88■■□□□ 1.89
Gm3383J3QQ59 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Gm3383J3QQ59 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Gm3383J3QQ59 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Gm3383J3QQ59 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.86■■□□□ 1.89
Gm3383J3QQ59 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms