Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
B020004C17RikJ3QP07 Nkain2-201ENSMUST00000092602 558 ntBASIC28.84■■■□□ 2.21
B020004C17RikJ3QP07 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
B020004C17RikJ3QP07 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
B020004C17RikJ3QP07 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
B020004C17RikJ3QP07 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
B020004C17RikJ3QP07 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.82■■■□□ 2.2
B020004C17RikJ3QP07 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
B020004C17RikJ3QP07 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
B020004C17RikJ3QP07 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
B020004C17RikJ3QP07 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.79■■■□□ 2.2
B020004C17RikJ3QP07 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
B020004C17RikJ3QP07 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
B020004C17RikJ3QP07 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.78■■■□□ 2.2
B020004C17RikJ3QP07 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
B020004C17RikJ3QP07 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.77■■■□□ 2.2
B020004C17RikJ3QP07 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.77■■■□□ 2.2
B020004C17RikJ3QP07 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
B020004C17RikJ3QP07 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
B020004C17RikJ3QP07 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
B020004C17RikJ3QP07 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
B020004C17RikJ3QP07 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
B020004C17RikJ3QP07 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
B020004C17RikJ3QP07 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
B020004C17RikJ3QP07 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.71■■■□□ 2.19
B020004C17RikJ3QP07 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
B020004C17RikJ3QP07 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
B020004C17RikJ3QP07 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
B020004C17RikJ3QP07 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
B020004C17RikJ3QP07 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
B020004C17RikJ3QP07 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
B020004C17RikJ3QP07 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
B020004C17RikJ3QP07 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
B020004C17RikJ3QP07 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
B020004C17RikJ3QP07 Gm7432-201ENSMUST00000210343 879 ntBASIC28.66■■■□□ 2.18
B020004C17RikJ3QP07 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
B020004C17RikJ3QP07 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
B020004C17RikJ3QP07 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
B020004C17RikJ3QP07 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.62■■■□□ 2.17
B020004C17RikJ3QP07 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
B020004C17RikJ3QP07 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.61■■■□□ 2.17
B020004C17RikJ3QP07 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
B020004C17RikJ3QP07 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
B020004C17RikJ3QP07 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.6■■■□□ 2.17
B020004C17RikJ3QP07 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
B020004C17RikJ3QP07 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.6■■■□□ 2.17
B020004C17RikJ3QP07 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
B020004C17RikJ3QP07 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
B020004C17RikJ3QP07 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
B020004C17RikJ3QP07 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
B020004C17RikJ3QP07 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
B020004C17RikJ3QP07 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
B020004C17RikJ3QP07 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
B020004C17RikJ3QP07 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.54■■■□□ 2.16
B020004C17RikJ3QP07 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
B020004C17RikJ3QP07 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
B020004C17RikJ3QP07 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
B020004C17RikJ3QP07 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.5■■■□□ 2.15
B020004C17RikJ3QP07 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
B020004C17RikJ3QP07 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
B020004C17RikJ3QP07 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
B020004C17RikJ3QP07 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
B020004C17RikJ3QP07 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
B020004C17RikJ3QP07 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
B020004C17RikJ3QP07 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
B020004C17RikJ3QP07 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
B020004C17RikJ3QP07 Gm11599-201ENSMUST00000118720 878 ntBASIC28.43■■■□□ 2.14
B020004C17RikJ3QP07 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.43■■■□□ 2.14
B020004C17RikJ3QP07 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.43■■■□□ 2.14
B020004C17RikJ3QP07 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.43■■■□□ 2.14
B020004C17RikJ3QP07 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
B020004C17RikJ3QP07 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
B020004C17RikJ3QP07 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
B020004C17RikJ3QP07 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
B020004C17RikJ3QP07 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
B020004C17RikJ3QP07 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.4■■■□□ 2.14
B020004C17RikJ3QP07 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
B020004C17RikJ3QP07 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.38■■■□□ 2.13
B020004C17RikJ3QP07 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.37■■■□□ 2.13
B020004C17RikJ3QP07 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
B020004C17RikJ3QP07 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.35■■■□□ 2.13
B020004C17RikJ3QP07 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.35■■■□□ 2.13
B020004C17RikJ3QP07 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.31■■■□□ 2.12
B020004C17RikJ3QP07 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
B020004C17RikJ3QP07 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
B020004C17RikJ3QP07 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.29■■■□□ 2.12
B020004C17RikJ3QP07 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
B020004C17RikJ3QP07 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
B020004C17RikJ3QP07 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
B020004C17RikJ3QP07 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
B020004C17RikJ3QP07 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
B020004C17RikJ3QP07 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.26■■■□□ 2.12
B020004C17RikJ3QP07 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
B020004C17RikJ3QP07 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.26■■■□□ 2.11
B020004C17RikJ3QP07 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
B020004C17RikJ3QP07 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
B020004C17RikJ3QP07 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
B020004C17RikJ3QP07 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
B020004C17RikJ3QP07 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
B020004C17RikJ3QP07 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.23■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms