Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Sh3tc1G3X9F6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31■■■□□ 2.55
Sh3tc1G3X9F6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31■■■□□ 2.55
Sh3tc1G3X9F6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.98■■■□□ 2.55
Sh3tc1G3X9F6 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.98■■■□□ 2.55
Sh3tc1G3X9F6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Sh3tc1G3X9F6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Sh3tc1G3X9F6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Sh3tc1G3X9F6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Sh3tc1G3X9F6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Sh3tc1G3X9F6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Sh3tc1G3X9F6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
Sh3tc1G3X9F6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Sh3tc1G3X9F6 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.91■■■□□ 2.54
Sh3tc1G3X9F6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Sh3tc1G3X9F6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Sh3tc1G3X9F6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Sh3tc1G3X9F6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Sh3tc1G3X9F6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Sh3tc1G3X9F6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Sh3tc1G3X9F6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Sh3tc1G3X9F6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
Sh3tc1G3X9F6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
Sh3tc1G3X9F6 Nkain2-201ENSMUST00000092602 558 ntBASIC30.87■■■□□ 2.53
Sh3tc1G3X9F6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.86■■■□□ 2.53
Sh3tc1G3X9F6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.84■■■□□ 2.53
Sh3tc1G3X9F6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.82■■■□□ 2.52
Sh3tc1G3X9F6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Sh3tc1G3X9F6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
Sh3tc1G3X9F6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Sh3tc1G3X9F6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Sh3tc1G3X9F6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Sh3tc1G3X9F6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Sh3tc1G3X9F6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Sh3tc1G3X9F6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Sh3tc1G3X9F6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Sh3tc1G3X9F6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Sh3tc1G3X9F6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.74■■■□□ 2.51
Sh3tc1G3X9F6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.73■■■□□ 2.51
Sh3tc1G3X9F6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Sh3tc1G3X9F6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Sh3tc1G3X9F6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Sh3tc1G3X9F6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.71■■■□□ 2.51
Sh3tc1G3X9F6 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.7■■■□□ 2.51
Sh3tc1G3X9F6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Sh3tc1G3X9F6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Sh3tc1G3X9F6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Sh3tc1G3X9F6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Sh3tc1G3X9F6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Sh3tc1G3X9F6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.67■■■□□ 2.5
Sh3tc1G3X9F6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Sh3tc1G3X9F6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Sh3tc1G3X9F6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Sh3tc1G3X9F6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Sh3tc1G3X9F6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Sh3tc1G3X9F6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.62■■■□□ 2.49
Sh3tc1G3X9F6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.62■■■□□ 2.49
Sh3tc1G3X9F6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Sh3tc1G3X9F6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
Sh3tc1G3X9F6 Gm7432-201ENSMUST00000210343 879 ntBASIC30.6■■■□□ 2.49
Sh3tc1G3X9F6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Sh3tc1G3X9F6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Sh3tc1G3X9F6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Sh3tc1G3X9F6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Sh3tc1G3X9F6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.56■■■□□ 2.48
Sh3tc1G3X9F6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Sh3tc1G3X9F6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Sh3tc1G3X9F6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Sh3tc1G3X9F6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.48
Sh3tc1G3X9F6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Sh3tc1G3X9F6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Sh3tc1G3X9F6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Sh3tc1G3X9F6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Sh3tc1G3X9F6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Sh3tc1G3X9F6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.47■■■□□ 2.47
Sh3tc1G3X9F6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.47■■■□□ 2.47
Sh3tc1G3X9F6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Sh3tc1G3X9F6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Sh3tc1G3X9F6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.45■■■□□ 2.46
Sh3tc1G3X9F6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Sh3tc1G3X9F6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Sh3tc1G3X9F6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Sh3tc1G3X9F6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Sh3tc1G3X9F6 Gm11599-201ENSMUST00000118720 878 ntBASIC30.41■■■□□ 2.46
Sh3tc1G3X9F6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Sh3tc1G3X9F6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Sh3tc1G3X9F6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
Sh3tc1G3X9F6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
Sh3tc1G3X9F6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Sh3tc1G3X9F6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Sh3tc1G3X9F6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.34■■■□□ 2.45
Sh3tc1G3X9F6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.34■■■□□ 2.45
Sh3tc1G3X9F6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Sh3tc1G3X9F6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Sh3tc1G3X9F6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30.32■■■□□ 2.44
Sh3tc1G3X9F6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30.31■■■□□ 2.44
Sh3tc1G3X9F6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Sh3tc1G3X9F6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Sh3tc1G3X9F6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Sh3tc1G3X9F6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.28■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms