Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm3543D3Z235 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Gm3543D3Z235 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm3543D3Z235 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Gm3543D3Z235 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm3543D3Z235 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gm3543D3Z235 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
Gm3543D3Z235 Gm24970-201ENSMUST00000175582 82 ntBASIC22.26■■□□□ 1.15
Gm3543D3Z235 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.26■■□□□ 1.15
Gm3543D3Z235 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm3543D3Z235 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Gm3543D3Z235 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm3543D3Z235 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
Gm3543D3Z235 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.23■■□□□ 1.15
Gm3543D3Z235 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm3543D3Z235 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm3543D3Z235 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm3543D3Z235 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm3543D3Z235 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm3543D3Z235 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
Gm3543D3Z235 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm3543D3Z235 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Gm3543D3Z235 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Gm3543D3Z235 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm3543D3Z235 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Gm3543D3Z235 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3543D3Z235 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3543D3Z235 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3543D3Z235 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm3543D3Z235 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm3543D3Z235 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.14
Gm3543D3Z235 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm3543D3Z235 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3543D3Z235 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3543D3Z235 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3543D3Z235 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3543D3Z235 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3543D3Z235 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
Gm3543D3Z235 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3543D3Z235 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Gm3543D3Z235 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.1■■□□□ 1.13
Gm3543D3Z235 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3543D3Z235 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.09■■□□□ 1.13
Gm3543D3Z235 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm3543D3Z235 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm3543D3Z235 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.07■■□□□ 1.12
Gm3543D3Z235 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3543D3Z235 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3543D3Z235 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.06■■□□□ 1.12
Gm3543D3Z235 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3543D3Z235 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gm3543D3Z235 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3543D3Z235 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3543D3Z235 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm3543D3Z235 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.02■■□□□ 1.12
Gm3543D3Z235 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm3543D3Z235 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Gm3543D3Z235 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm3543D3Z235 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Gm3543D3Z235 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Gm3543D3Z235 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm3543D3Z235 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Gm3543D3Z235 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Gm3543D3Z235 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm3543D3Z235 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3543D3Z235 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3543D3Z235 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Gm3543D3Z235 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
Gm3543D3Z235 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.99■■□□□ 1.11
Gm3543D3Z235 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3543D3Z235 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm3543D3Z235 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.98■■□□□ 1.11
Gm3543D3Z235 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm3543D3Z235 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Gm3543D3Z235 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.97■■□□□ 1.11
Gm3543D3Z235 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Gm3543D3Z235 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.95■■□□□ 1.1
Gm3543D3Z235 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm3543D3Z235 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.94■■□□□ 1.1
Gm3543D3Z235 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Gm3543D3Z235 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Gm3543D3Z235 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Gm3543D3Z235 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Gm3543D3Z235 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Gm3543D3Z235 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm3543D3Z235 Amer2-203ENSMUST00000225247 2662 ntBASIC21.93■■□□□ 1.1
Gm3543D3Z235 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3543D3Z235 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3543D3Z235 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3543D3Z235 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm3543D3Z235 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm3543D3Z235 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm3543D3Z235 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Gm3543D3Z235 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.9■■□□□ 1.1
Gm3543D3Z235 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm3543D3Z235 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gm3543D3Z235 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Gm3543D3Z235 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm3543D3Z235 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm3543D3Z235 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms