Protein–RNA interactions for Protein: A1L3C8

Gm5089, EG328479 protein, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5089A1L3C8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Gm5089A1L3C8 Nkain2-201ENSMUST00000092602 558 ntBASIC20.23■□□□□ 0.83
Gm5089A1L3C8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5089A1L3C8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5089A1L3C8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gm5089A1L3C8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.21■□□□□ 0.83
Gm5089A1L3C8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.2■□□□□ 0.82
Gm5089A1L3C8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.2■□□□□ 0.82
Gm5089A1L3C8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5089A1L3C8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5089A1L3C8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5089A1L3C8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5089A1L3C8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5089A1L3C8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.19■□□□□ 0.82
Gm5089A1L3C8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5089A1L3C8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5089A1L3C8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5089A1L3C8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Gm5089A1L3C8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5089A1L3C8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5089A1L3C8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5089A1L3C8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5089A1L3C8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5089A1L3C8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5089A1L3C8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
Gm5089A1L3C8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5089A1L3C8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5089A1L3C8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5089A1L3C8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5089A1L3C8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.14■□□□□ 0.81
Gm5089A1L3C8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5089A1L3C8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5089A1L3C8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5089A1L3C8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5089A1L3C8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5089A1L3C8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5089A1L3C8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm5089A1L3C8 Gm7432-201ENSMUST00000210343 879 ntBASIC20.09■□□□□ 0.81
Gm5089A1L3C8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm5089A1L3C8 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.08■□□□□ 0.81
Gm5089A1L3C8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm5089A1L3C8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm5089A1L3C8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm5089A1L3C8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5089A1L3C8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Gm5089A1L3C8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Gm5089A1L3C8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5089A1L3C8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm5089A1L3C8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Gm5089A1L3C8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm5089A1L3C8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Gm5089A1L3C8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm5089A1L3C8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm5089A1L3C8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.99■□□□□ 0.79
Gm5089A1L3C8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm5089A1L3C8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Gm5089A1L3C8 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.98■□□□□ 0.79
Gm5089A1L3C8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm5089A1L3C8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm5089A1L3C8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm5089A1L3C8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm5089A1L3C8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm5089A1L3C8 Gm11599-201ENSMUST00000118720 878 ntBASIC19.95■□□□□ 0.78
Gm5089A1L3C8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.95■□□□□ 0.78
Gm5089A1L3C8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm5089A1L3C8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm5089A1L3C8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm5089A1L3C8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Gm5089A1L3C8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Gm5089A1L3C8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm5089A1L3C8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm5089A1L3C8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm5089A1L3C8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm5089A1L3C8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm5089A1L3C8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm5089A1L3C8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.91■□□□□ 0.78
Gm5089A1L3C8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm5089A1L3C8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Gm5089A1L3C8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
Gm5089A1L3C8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.89■□□□□ 0.77
Gm5089A1L3C8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.88■□□□□ 0.77
Gm5089A1L3C8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm5089A1L3C8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm5089A1L3C8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm5089A1L3C8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.86■□□□□ 0.77
Gm5089A1L3C8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Gm5089A1L3C8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5089A1L3C8 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.85■□□□□ 0.77
Gm5089A1L3C8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm5089A1L3C8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.83■□□□□ 0.77
Gm5089A1L3C8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.82■□□□□ 0.76
Gm5089A1L3C8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.81■□□□□ 0.76
Gm5089A1L3C8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm5089A1L3C8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm5089A1L3C8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.8■□□□□ 0.76
Gm5089A1L3C8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm5089A1L3C8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Gm5089A1L3C8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5089A1L3C8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.79■□□□□ 0.76
Gm5089A1L3C8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms