Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rpl9-ps6A0A140T8T4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rpl9-ps6A0A140T8T4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
Rpl9-ps6A0A140T8T4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Rpl9-ps6A0A140T8T4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
Rpl9-ps6A0A140T8T4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rpl9-ps6A0A140T8T4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rpl9-ps6A0A140T8T4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.82■■□□□ 1.72
Rpl9-ps6A0A140T8T4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rpl9-ps6A0A140T8T4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Rpl9-ps6A0A140T8T4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.8■■□□□ 1.72
Rpl9-ps6A0A140T8T4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Rpl9-ps6A0A140T8T4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Rpl9-ps6A0A140T8T4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rpl9-ps6A0A140T8T4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Rpl9-ps6A0A140T8T4 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.77■■□□□ 1.72
Rpl9-ps6A0A140T8T4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rpl9-ps6A0A140T8T4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rpl9-ps6A0A140T8T4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.73■■□□□ 1.71
Rpl9-ps6A0A140T8T4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Rpl9-ps6A0A140T8T4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rpl9-ps6A0A140T8T4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rpl9-ps6A0A140T8T4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rpl9-ps6A0A140T8T4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rpl9-ps6A0A140T8T4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Rpl9-ps6A0A140T8T4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Rpl9-ps6A0A140T8T4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Rpl9-ps6A0A140T8T4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.7■■□□□ 1.7
Rpl9-ps6A0A140T8T4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Rpl9-ps6A0A140T8T4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Rpl9-ps6A0A140T8T4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rpl9-ps6A0A140T8T4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Rpl9-ps6A0A140T8T4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Rpl9-ps6A0A140T8T4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rpl9-ps6A0A140T8T4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rpl9-ps6A0A140T8T4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Rpl9-ps6A0A140T8T4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Rpl9-ps6A0A140T8T4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.61■■□□□ 1.69
Rpl9-ps6A0A140T8T4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rpl9-ps6A0A140T8T4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rpl9-ps6A0A140T8T4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rpl9-ps6A0A140T8T4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Rpl9-ps6A0A140T8T4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.57■■□□□ 1.68
Rpl9-ps6A0A140T8T4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
Rpl9-ps6A0A140T8T4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.55■■□□□ 1.68
Rpl9-ps6A0A140T8T4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rpl9-ps6A0A140T8T4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rpl9-ps6A0A140T8T4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.55■■□□□ 1.68
Rpl9-ps6A0A140T8T4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.54■■□□□ 1.68
Rpl9-ps6A0A140T8T4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Rpl9-ps6A0A140T8T4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Rpl9-ps6A0A140T8T4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rpl9-ps6A0A140T8T4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.52■■□□□ 1.68
Rpl9-ps6A0A140T8T4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rpl9-ps6A0A140T8T4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Rpl9-ps6A0A140T8T4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rpl9-ps6A0A140T8T4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rpl9-ps6A0A140T8T4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rpl9-ps6A0A140T8T4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rpl9-ps6A0A140T8T4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rpl9-ps6A0A140T8T4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Rpl9-ps6A0A140T8T4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rpl9-ps6A0A140T8T4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rpl9-ps6A0A140T8T4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rpl9-ps6A0A140T8T4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
Rpl9-ps6A0A140T8T4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rpl9-ps6A0A140T8T4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.44■■□□□ 1.66
Rpl9-ps6A0A140T8T4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rpl9-ps6A0A140T8T4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rpl9-ps6A0A140T8T4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Rpl9-ps6A0A140T8T4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rpl9-ps6A0A140T8T4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rpl9-ps6A0A140T8T4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rpl9-ps6A0A140T8T4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Rpl9-ps6A0A140T8T4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.4■■□□□ 1.66
Rpl9-ps6A0A140T8T4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.4■■□□□ 1.66
Rpl9-ps6A0A140T8T4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpl9-ps6A0A140T8T4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Rpl9-ps6A0A140T8T4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rpl9-ps6A0A140T8T4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rpl9-ps6A0A140T8T4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Rpl9-ps6A0A140T8T4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rpl9-ps6A0A140T8T4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rpl9-ps6A0A140T8T4 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.35■■□□□ 1.65
Rpl9-ps6A0A140T8T4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rpl9-ps6A0A140T8T4 Zxda-201ENSMUST00000117281 2621 ntBASIC25.34■■□□□ 1.65
Rpl9-ps6A0A140T8T4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rpl9-ps6A0A140T8T4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
Rpl9-ps6A0A140T8T4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rpl9-ps6A0A140T8T4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.32■■□□□ 1.64
Rpl9-ps6A0A140T8T4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.32■■□□□ 1.64
Rpl9-ps6A0A140T8T4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rpl9-ps6A0A140T8T4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rpl9-ps6A0A140T8T4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rpl9-ps6A0A140T8T4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rpl9-ps6A0A140T8T4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Rpl9-ps6A0A140T8T4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms