Protein–RNA interactions for Protein: A0A0G2JGD3

Tmem116, Transmembrane protein 116 (Fragment), mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem116A0A0G2JGD3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.75■□□□□ 0.91
Tmem116A0A0G2JGD3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmem116A0A0G2JGD3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmem116A0A0G2JGD3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmem116A0A0G2JGD3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tmem116A0A0G2JGD3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmem116A0A0G2JGD3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.73■□□□□ 0.91
Tmem116A0A0G2JGD3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.73■□□□□ 0.91
Tmem116A0A0G2JGD3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmem116A0A0G2JGD3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmem116A0A0G2JGD3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmem116A0A0G2JGD3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tmem116A0A0G2JGD3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmem116A0A0G2JGD3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tmem116A0A0G2JGD3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tmem116A0A0G2JGD3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tmem116A0A0G2JGD3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.68■□□□□ 0.9
Tmem116A0A0G2JGD3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Tmem116A0A0G2JGD3 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.68■□□□□ 0.9
Tmem116A0A0G2JGD3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmem116A0A0G2JGD3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tmem116A0A0G2JGD3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmem116A0A0G2JGD3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tmem116A0A0G2JGD3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tmem116A0A0G2JGD3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tmem116A0A0G2JGD3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tmem116A0A0G2JGD3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.65■□□□□ 0.9
Tmem116A0A0G2JGD3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.64■□□□□ 0.89
Tmem116A0A0G2JGD3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Tmem116A0A0G2JGD3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tmem116A0A0G2JGD3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem116A0A0G2JGD3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem116A0A0G2JGD3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem116A0A0G2JGD3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem116A0A0G2JGD3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.61■□□□□ 0.89
Tmem116A0A0G2JGD3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tmem116A0A0G2JGD3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tmem116A0A0G2JGD3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tmem116A0A0G2JGD3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem116A0A0G2JGD3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tmem116A0A0G2JGD3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmem116A0A0G2JGD3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Tmem116A0A0G2JGD3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem116A0A0G2JGD3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem116A0A0G2JGD3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.57■□□□□ 0.88
Tmem116A0A0G2JGD3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Tmem116A0A0G2JGD3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem116A0A0G2JGD3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem116A0A0G2JGD3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem116A0A0G2JGD3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem116A0A0G2JGD3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.53■□□□□ 0.88
Tmem116A0A0G2JGD3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem116A0A0G2JGD3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmem116A0A0G2JGD3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.52■□□□□ 0.87
Tmem116A0A0G2JGD3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem116A0A0G2JGD3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem116A0A0G2JGD3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.51■□□□□ 0.87
Tmem116A0A0G2JGD3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmem116A0A0G2JGD3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmem116A0A0G2JGD3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmem116A0A0G2JGD3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Tmem116A0A0G2JGD3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmem116A0A0G2JGD3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmem116A0A0G2JGD3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.49■□□□□ 0.87
Tmem116A0A0G2JGD3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tmem116A0A0G2JGD3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.47■□□□□ 0.87
Tmem116A0A0G2JGD3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Tmem116A0A0G2JGD3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tmem116A0A0G2JGD3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.47■□□□□ 0.87
Tmem116A0A0G2JGD3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tmem116A0A0G2JGD3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.46■□□□□ 0.87
Tmem116A0A0G2JGD3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem116A0A0G2JGD3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.45■□□□□ 0.86
Tmem116A0A0G2JGD3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tmem116A0A0G2JGD3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tmem116A0A0G2JGD3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tmem116A0A0G2JGD3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tmem116A0A0G2JGD3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Tmem116A0A0G2JGD3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmem116A0A0G2JGD3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tmem116A0A0G2JGD3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmem116A0A0G2JGD3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.42■□□□□ 0.86
Tmem116A0A0G2JGD3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem116A0A0G2JGD3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem116A0A0G2JGD3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tmem116A0A0G2JGD3 Zxda-201ENSMUST00000117281 2621 ntBASIC20.4■□□□□ 0.86
Tmem116A0A0G2JGD3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.39■□□□□ 0.85
Tmem116A0A0G2JGD3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmem116A0A0G2JGD3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tmem116A0A0G2JGD3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tmem116A0A0G2JGD3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem116A0A0G2JGD3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Tmem116A0A0G2JGD3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem116A0A0G2JGD3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem116A0A0G2JGD3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.36■□□□□ 0.85
Tmem116A0A0G2JGD3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem116A0A0G2JGD3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem116A0A0G2JGD3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem116A0A0G2JGD3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem116A0A0G2JGD3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms