Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ighv1-43A0A0A6YXN5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ighv1-43A0A0A6YXN5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ighv1-43A0A0A6YXN5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ighv1-43A0A0A6YXN5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ighv1-43A0A0A6YXN5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ighv1-43A0A0A6YXN5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ighv1-43A0A0A6YXN5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ighv1-43A0A0A6YXN5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ighv1-43A0A0A6YXN5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ighv1-43A0A0A6YXN5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ighv1-43A0A0A6YXN5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ighv1-43A0A0A6YXN5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ighv1-43A0A0A6YXN5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.16■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ighv1-43A0A0A6YXN5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.16■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.16■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.16■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ighv1-43A0A0A6YXN5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ighv1-43A0A0A6YXN5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ighv1-43A0A0A6YXN5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ighv1-43A0A0A6YXN5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ighv1-43A0A0A6YXN5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ighv1-43A0A0A6YXN5 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.1■■□□□ 1.29
Ighv1-43A0A0A6YXN5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Ighv1-43A0A0A6YXN5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ighv1-43A0A0A6YXN5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ighv1-43A0A0A6YXN5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ighv1-43A0A0A6YXN5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ighv1-43A0A0A6YXN5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Ighv1-43A0A0A6YXN5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ighv1-43A0A0A6YXN5 Gm8503-201ENSMUST00000118131 455 ntBASIC23.04■■□□□ 1.28
Ighv1-43A0A0A6YXN5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ighv1-43A0A0A6YXN5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ighv1-43A0A0A6YXN5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.03■■□□□ 1.28
Ighv1-43A0A0A6YXN5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.02■■□□□ 1.28
Ighv1-43A0A0A6YXN5 Gm6821-201ENSMUST00000107540 542 ntBASIC23.02■■□□□ 1.28
Ighv1-43A0A0A6YXN5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.01■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ighv1-43A0A0A6YXN5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ighv1-43A0A0A6YXN5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.96■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.96■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ighv1-43A0A0A6YXN5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ighv1-43A0A0A6YXN5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ighv1-43A0A0A6YXN5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ighv1-43A0A0A6YXN5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.94■■□□□ 1.26
Ighv1-43A0A0A6YXN5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ighv1-43A0A0A6YXN5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ighv1-43A0A0A6YXN5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ighv1-43A0A0A6YXN5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ighv1-43A0A0A6YXN5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ighv1-43A0A0A6YXN5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ighv1-43A0A0A6YXN5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.91■■□□□ 1.26
Ighv1-43A0A0A6YXN5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Ighv1-43A0A0A6YXN5 Nkain2-201ENSMUST00000092602 558 ntBASIC22.9■■□□□ 1.26
Ighv1-43A0A0A6YXN5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.89■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ighv1-43A0A0A6YXN5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.85■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ighv1-43A0A0A6YXN5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Ighv1-43A0A0A6YXN5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms