Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13-1A0A075B644 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13-1A0A075B644 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13-1A0A075B644 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13-1A0A075B644 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13-1A0A075B644 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13-1A0A075B644 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.41■□□□□ 0.38
Trav13-1A0A075B644 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13-1A0A075B644 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13-1A0A075B644 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.41■□□□□ 0.38
Trav13-1A0A075B644 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13-1A0A075B644 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Trav13-1A0A075B644 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13-1A0A075B644 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13-1A0A075B644 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13-1A0A075B644 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13-1A0A075B644 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13-1A0A075B644 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav13-1A0A075B644 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav13-1A0A075B644 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Trav13-1A0A075B644 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.37■□□□□ 0.37
Trav13-1A0A075B644 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13-1A0A075B644 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13-1A0A075B644 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.35■□□□□ 0.37
Trav13-1A0A075B644 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav13-1A0A075B644 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13-1A0A075B644 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13-1A0A075B644 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav13-1A0A075B644 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.34■□□□□ 0.37
Trav13-1A0A075B644 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13-1A0A075B644 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13-1A0A075B644 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.32■□□□□ 0.36
Trav13-1A0A075B644 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13-1A0A075B644 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav13-1A0A075B644 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13-1A0A075B644 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.31■□□□□ 0.36
Trav13-1A0A075B644 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13-1A0A075B644 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13-1A0A075B644 Zxda-201ENSMUST00000117281 2621 ntBASIC17.29■□□□□ 0.36
Trav13-1A0A075B644 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13-1A0A075B644 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13-1A0A075B644 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13-1A0A075B644 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13-1A0A075B644 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13-1A0A075B644 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav13-1A0A075B644 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13-1A0A075B644 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav13-1A0A075B644 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav13-1A0A075B644 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav13-1A0A075B644 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13-1A0A075B644 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13-1A0A075B644 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13-1A0A075B644 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13-1A0A075B644 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13-1A0A075B644 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.24■□□□□ 0.35
Trav13-1A0A075B644 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13-1A0A075B644 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13-1A0A075B644 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13-1A0A075B644 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav13-1A0A075B644 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.23■□□□□ 0.35
Trav13-1A0A075B644 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13-1A0A075B644 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13-1A0A075B644 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13-1A0A075B644 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13-1A0A075B644 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13-1A0A075B644 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav13-1A0A075B644 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13-1A0A075B644 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13-1A0A075B644 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13-1A0A075B644 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13-1A0A075B644 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13-1A0A075B644 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13-1A0A075B644 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13-1A0A075B644 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Trav13-1A0A075B644 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13-1A0A075B644 Gm6821-201ENSMUST00000107540 542 ntBASIC17.18■□□□□ 0.34
Trav13-1A0A075B644 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trav13-1A0A075B644 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13-1A0A075B644 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav13-1A0A075B644 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13-1A0A075B644 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.18■□□□□ 0.34
Trav13-1A0A075B644 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trav13-1A0A075B644 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13-1A0A075B644 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13-1A0A075B644 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13-1A0A075B644 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13-1A0A075B644 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13-1A0A075B644 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13-1A0A075B644 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13-1A0A075B644 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13-1A0A075B644 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13-1A0A075B644 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13-1A0A075B644 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13-1A0A075B644 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav13-1A0A075B644 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13-1A0A075B644 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13-1A0A075B644 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13-1A0A075B644 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13-1A0A075B644 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.12■□□□□ 0.33
Trav13-1A0A075B644 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms