Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.34■■□□□ 1.17
Ighv1-54A0A075B5W5 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.34■■□□□ 1.17
Ighv1-54A0A075B5W5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ighv1-54A0A075B5W5 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.34■■□□□ 1.17
Ighv1-54A0A075B5W5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ighv1-54A0A075B5W5 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.33■■□□□ 1.16
Ighv1-54A0A075B5W5 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.33■■□□□ 1.16
Ighv1-54A0A075B5W5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ighv1-54A0A075B5W5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ighv1-54A0A075B5W5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ighv1-54A0A075B5W5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.31■■□□□ 1.16
Ighv1-54A0A075B5W5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.31■■□□□ 1.16
Ighv1-54A0A075B5W5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ighv1-54A0A075B5W5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ighv1-54A0A075B5W5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Ighv1-54A0A075B5W5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ighv1-54A0A075B5W5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.28■■□□□ 1.16
Ighv1-54A0A075B5W5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ighv1-54A0A075B5W5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ighv1-54A0A075B5W5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ighv1-54A0A075B5W5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.25■■□□□ 1.15
Ighv1-54A0A075B5W5 Gm9397-201ENSMUST00000200125 605 ntBASIC22.24■■□□□ 1.15
Ighv1-54A0A075B5W5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
Ighv1-54A0A075B5W5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ighv1-54A0A075B5W5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.23■■□□□ 1.15
Ighv1-54A0A075B5W5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
Ighv1-54A0A075B5W5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ighv1-54A0A075B5W5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Ighv1-54A0A075B5W5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Ighv1-54A0A075B5W5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ighv1-54A0A075B5W5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ighv1-54A0A075B5W5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ighv1-54A0A075B5W5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ighv1-54A0A075B5W5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.19■■□□□ 1.14
Ighv1-54A0A075B5W5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ighv1-54A0A075B5W5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ighv1-54A0A075B5W5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ighv1-54A0A075B5W5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.18■■□□□ 1.14
Ighv1-54A0A075B5W5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv1-54A0A075B5W5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv1-54A0A075B5W5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.17■■□□□ 1.14
Ighv1-54A0A075B5W5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.16■■□□□ 1.14
Ighv1-54A0A075B5W5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ighv1-54A0A075B5W5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ighv1-54A0A075B5W5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.15■■□□□ 1.14
Ighv1-54A0A075B5W5 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.14■■□□□ 1.13
Ighv1-54A0A075B5W5 Gm45855-201ENSMUST00000212546 880 ntBASIC22.14■■□□□ 1.13
Ighv1-54A0A075B5W5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.14■■□□□ 1.13
Ighv1-54A0A075B5W5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.14■■□□□ 1.13
Ighv1-54A0A075B5W5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ighv1-54A0A075B5W5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ighv1-54A0A075B5W5 Gm24970-201ENSMUST00000175582 82 ntBASIC22.12■■□□□ 1.13
Ighv1-54A0A075B5W5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ighv1-54A0A075B5W5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.11■■□□□ 1.13
Ighv1-54A0A075B5W5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ighv1-54A0A075B5W5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ighv1-54A0A075B5W5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ighv1-54A0A075B5W5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Ighv1-54A0A075B5W5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Ighv1-54A0A075B5W5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
Ighv1-54A0A075B5W5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ighv1-54A0A075B5W5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Ighv1-54A0A075B5W5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ighv1-54A0A075B5W5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.08■■□□□ 1.12
Ighv1-54A0A075B5W5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.08■■□□□ 1.12
Ighv1-54A0A075B5W5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ighv1-54A0A075B5W5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ighv1-54A0A075B5W5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ighv1-54A0A075B5W5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.05■■□□□ 1.12
Ighv1-54A0A075B5W5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.05■■□□□ 1.12
Ighv1-54A0A075B5W5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.04■■□□□ 1.12
Ighv1-54A0A075B5W5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ighv1-54A0A075B5W5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ighv1-54A0A075B5W5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ighv1-54A0A075B5W5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ighv1-54A0A075B5W5 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.03■■□□□ 1.12
Ighv1-54A0A075B5W5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ighv1-54A0A075B5W5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ighv1-54A0A075B5W5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv1-54A0A075B5W5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv1-54A0A075B5W5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ighv1-54A0A075B5W5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ighv1-54A0A075B5W5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ighv1-54A0A075B5W5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ighv1-54A0A075B5W5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ighv1-54A0A075B5W5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Ighv1-54A0A075B5W5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Ighv1-54A0A075B5W5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv1-54A0A075B5W5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv1-54A0A075B5W5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv1-54A0A075B5W5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv1-54A0A075B5W5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv1-54A0A075B5W5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv1-54A0A075B5W5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv1-54A0A075B5W5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ighv1-54A0A075B5W5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ighv1-54A0A075B5W5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
Ighv1-54A0A075B5W5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ighv1-54A0A075B5W5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.95■■□□□ 1.1
Ighv1-54A0A075B5W5 Amer2-203ENSMUST00000225247 2662 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms