Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim60Q8VI40 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim60Q8VI40 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim60Q8VI40 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim60Q8VI40 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim60Q8VI40 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim60Q8VI40 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.11■□□□□ 0.65
Trim60Q8VI40 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim60Q8VI40 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim60Q8VI40 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.11■□□□□ 0.65
Trim60Q8VI40 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.11■□□□□ 0.65
Trim60Q8VI40 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trim60Q8VI40 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim60Q8VI40 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim60Q8VI40 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim60Q8VI40 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim60Q8VI40 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim60Q8VI40 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim60Q8VI40 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim60Q8VI40 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.1■□□□□ 0.65
Trim60Q8VI40 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim60Q8VI40 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trim60Q8VI40 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim60Q8VI40 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim60Q8VI40 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim60Q8VI40 Gm40848-201ENSMUST00000221998 324 ntBASIC19.1■□□□□ 0.65
Trim60Q8VI40 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim60Q8VI40 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim60Q8VI40 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim60Q8VI40 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim60Q8VI40 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim60Q8VI40 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim60Q8VI40 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim60Q8VI40 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim60Q8VI40 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim60Q8VI40 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim60Q8VI40 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim60Q8VI40 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim60Q8VI40 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim60Q8VI40 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trim60Q8VI40 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim60Q8VI40 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim60Q8VI40 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
Trim60Q8VI40 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.08■□□□□ 0.65
Trim60Q8VI40 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim60Q8VI40 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim60Q8VI40 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Trim60Q8VI40 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim60Q8VI40 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim60Q8VI40 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim60Q8VI40 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.06■□□□□ 0.64
Trim60Q8VI40 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Gm38205-201ENSMUST00000192243 258 ntBASIC19.06■□□□□ 0.64
Trim60Q8VI40 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 179.8 ms