Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.83■□□□□ 0.6
Thumpd3P97770 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.82■□□□□ 0.6
Thumpd3P97770 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Thumpd3P97770 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Thumpd3P97770 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.82■□□□□ 0.6
Thumpd3P97770 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd3P97770 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd3P97770 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd3P97770 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd3P97770 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd3P97770 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd3P97770 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd3P97770 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd3P97770 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd3P97770 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd3P97770 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd3P97770 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.81■□□□□ 0.6
Thumpd3P97770 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Thumpd3P97770 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.81■□□□□ 0.6
Thumpd3P97770 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.81■□□□□ 0.6
Thumpd3P97770 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.81■□□□□ 0.6
Thumpd3P97770 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.81■□□□□ 0.6
Thumpd3P97770 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.81■□□□□ 0.6
Thumpd3P97770 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Thumpd3P97770 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Thumpd3P97770 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd3P97770 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd3P97770 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd3P97770 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd3P97770 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd3P97770 Grk6-206ENSMUST00000224995 2971 ntBASIC18.8■□□□□ 0.6
Thumpd3P97770 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd3P97770 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd3P97770 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.8■□□□□ 0.6
Thumpd3P97770 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.8■□□□□ 0.6
Thumpd3P97770 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd3P97770 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd3P97770 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd3P97770 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd3P97770 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd3P97770 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd3P97770 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Thumpd3P97770 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd3P97770 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd3P97770 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd3P97770 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd3P97770 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Thumpd3P97770 Gm11421-201ENSMUST00000122124 294 ntBASIC18.79■□□□□ 0.6
Thumpd3P97770 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.79■□□□□ 0.6
Thumpd3P97770 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd3P97770 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd3P97770 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd3P97770 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd3P97770 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Thumpd3P97770 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.79■□□□□ 0.6
Thumpd3P97770 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd3P97770 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd3P97770 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd3P97770 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Thumpd3P97770 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Thumpd3P97770 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Gm42569-201ENSMUST00000200539 472 ntBASIC18.78■□□□□ 0.6
Thumpd3P97770 Gm42642-201ENSMUST00000200683 355 ntBASIC18.78■□□□□ 0.6
Thumpd3P97770 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.78■□□□□ 0.6
Thumpd3P97770 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Thumpd3P97770 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Thumpd3P97770 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Thumpd3P97770 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.78■□□□□ 0.6
Thumpd3P97770 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd3P97770 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Thumpd3P97770 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd3P97770 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd3P97770 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.77■□□□□ 0.6
Thumpd3P97770 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd3P97770 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 1084.5 ms