Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cml3Q9JIY8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cml3Q9JIY8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cml3Q9JIY8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cml3Q9JIY8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cml3Q9JIY8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cml3Q9JIY8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cml3Q9JIY8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cml3Q9JIY8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cml3Q9JIY8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cml3Q9JIY8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cml3Q9JIY8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cml3Q9JIY8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms