Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf4Q8K4J2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf4Q8K4J2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf4Q8K4J2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf4Q8K4J2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf4Q8K4J2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ebf4Q8K4J2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf4Q8K4J2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf4Q8K4J2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf4Q8K4J2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf4Q8K4J2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf4Q8K4J2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf4Q8K4J2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.02■□□□□ 0.32
Ebf4Q8K4J2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf4Q8K4J2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf4Q8K4J2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ebf4Q8K4J2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf4Q8K4J2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf4Q8K4J2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
Ebf4Q8K4J2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Ebf4Q8K4J2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf4Q8K4J2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
Ebf4Q8K4J2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf4Q8K4J2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf4Q8K4J2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf4Q8K4J2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ebf4Q8K4J2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf4Q8K4J2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf4Q8K4J2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf4Q8K4J2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf4Q8K4J2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ebf4Q8K4J2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf4Q8K4J2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17■□□□□ 0.31
Ebf4Q8K4J2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17■□□□□ 0.31
Ebf4Q8K4J2 Gm45244-201ENSMUST00000211328 2200 ntBASIC17■□□□□ 0.31
Ebf4Q8K4J2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ebf4Q8K4J2 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf4Q8K4J2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Gm43566-201ENSMUST00000196851 808 ntBASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Gm40881-201ENSMUST00000223397 166 ntBASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf4Q8K4J2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ebf4Q8K4J2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf4Q8K4J2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf4Q8K4J2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf4Q8K4J2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf4Q8K4J2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.97■□□□□ 0.31
Ebf4Q8K4J2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms