Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrif1Q8CDD9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lrif1Q8CDD9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrif1Q8CDD9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.63■□□□□ 0.57
Lrif1Q8CDD9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.63■□□□□ 0.57
Lrif1Q8CDD9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrif1Q8CDD9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.63■□□□□ 0.57
Lrif1Q8CDD9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrif1Q8CDD9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Lrif1Q8CDD9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrif1Q8CDD9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrif1Q8CDD9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.63■□□□□ 0.57
Lrif1Q8CDD9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lrif1Q8CDD9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Lrif1Q8CDD9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.63■□□□□ 0.57
Lrif1Q8CDD9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Gm43530-201ENSMUST00000195920 274 ntBASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Gm45417-201ENSMUST00000209533 758 ntBASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrif1Q8CDD9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lrif1Q8CDD9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrif1Q8CDD9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lrif1Q8CDD9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrif1Q8CDD9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrif1Q8CDD9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Lrif1Q8CDD9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.6■□□□□ 0.57
Lrif1Q8CDD9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrif1Q8CDD9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lrif1Q8CDD9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lrif1Q8CDD9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lrif1Q8CDD9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrif1Q8CDD9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Lrif1Q8CDD9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrif1Q8CDD9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lrif1Q8CDD9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrif1Q8CDD9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrif1Q8CDD9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lrif1Q8CDD9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.59■□□□□ 0.57
Lrif1Q8CDD9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms