Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clns1aQ61189 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Clns1aQ61189 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clns1aQ61189 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Clns1aQ61189 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.16■□□□□ 0.18
Clns1aQ61189 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.16■□□□□ 0.18
Clns1aQ61189 Gm10232-201ENSMUST00000089221 720 ntBASIC16.16■□□□□ 0.18
Clns1aQ61189 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clns1aQ61189 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.16■□□□□ 0.18
Clns1aQ61189 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clns1aQ61189 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Clns1aQ61189 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clns1aQ61189 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clns1aQ61189 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clns1aQ61189 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clns1aQ61189 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clns1aQ61189 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clns1aQ61189 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.15■□□□□ 0.18
Clns1aQ61189 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clns1aQ61189 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.15■□□□□ 0.18
Clns1aQ61189 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clns1aQ61189 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clns1aQ61189 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clns1aQ61189 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Clns1aQ61189 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clns1aQ61189 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clns1aQ61189 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clns1aQ61189 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Clns1aQ61189 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Clns1aQ61189 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clns1aQ61189 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clns1aQ61189 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clns1aQ61189 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clns1aQ61189 Gm13238-201ENSMUST00000117655 780 ntBASIC16.14■□□□□ 0.17
Clns1aQ61189 Gm43566-201ENSMUST00000196851 808 ntBASIC16.14■□□□□ 0.17
Clns1aQ61189 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Clns1aQ61189 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clns1aQ61189 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clns1aQ61189 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.14■□□□□ 0.17
Clns1aQ61189 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clns1aQ61189 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clns1aQ61189 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clns1aQ61189 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Clns1aQ61189 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clns1aQ61189 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clns1aQ61189 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clns1aQ61189 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.13■□□□□ 0.17
Clns1aQ61189 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.13■□□□□ 0.17
Clns1aQ61189 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clns1aQ61189 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clns1aQ61189 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clns1aQ61189 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clns1aQ61189 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.12■□□□□ 0.17
Clns1aQ61189 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clns1aQ61189 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Clns1aQ61189 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Clns1aQ61189 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.12■□□□□ 0.17
Clns1aQ61189 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clns1aQ61189 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Clns1aQ61189 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.12■□□□□ 0.17
Clns1aQ61189 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clns1aQ61189 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.12■□□□□ 0.17
Clns1aQ61189 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clns1aQ61189 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clns1aQ61189 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.12■□□□□ 0.17
Clns1aQ61189 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clns1aQ61189 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clns1aQ61189 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clns1aQ61189 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clns1aQ61189 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clns1aQ61189 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clns1aQ61189 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clns1aQ61189 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clns1aQ61189 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clns1aQ61189 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clns1aQ61189 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.11■□□□□ 0.17
Clns1aQ61189 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clns1aQ61189 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clns1aQ61189 Etf1-202ENSMUST00000180351 108 ntBASIC16.11■□□□□ 0.17
Clns1aQ61189 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.11■□□□□ 0.17
Clns1aQ61189 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms