Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim43aQ3TL54 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43aQ3TL54 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43aQ3TL54 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43aQ3TL54 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43aQ3TL54 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43aQ3TL54 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43aQ3TL54 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43aQ3TL54 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim43aQ3TL54 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trim43aQ3TL54 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43aQ3TL54 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43aQ3TL54 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43aQ3TL54 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trim43aQ3TL54 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43aQ3TL54 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43aQ3TL54 Gm12821-201ENSMUST00000120022 600 ntBASIC20.05■□□□□ 0.8
Trim43aQ3TL54 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43aQ3TL54 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43aQ3TL54 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43aQ3TL54 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43aQ3TL54 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim43aQ3TL54 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim43aQ3TL54 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Trim43aQ3TL54 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trim43aQ3TL54 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43aQ3TL54 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43aQ3TL54 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43aQ3TL54 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43aQ3TL54 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trim43aQ3TL54 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43aQ3TL54 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.02■□□□□ 0.8
Trim43aQ3TL54 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.02■□□□□ 0.8
Trim43aQ3TL54 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43aQ3TL54 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.02■□□□□ 0.79
Trim43aQ3TL54 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43aQ3TL54 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43aQ3TL54 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim43aQ3TL54 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43aQ3TL54 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43aQ3TL54 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.01■□□□□ 0.79
Trim43aQ3TL54 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43aQ3TL54 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43aQ3TL54 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim43aQ3TL54 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43aQ3TL54 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim43aQ3TL54 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43aQ3TL54 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43aQ3TL54 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43aQ3TL54 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43aQ3TL54 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trim43aQ3TL54 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trim43aQ3TL54 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Trim43aQ3TL54 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20■□□□□ 0.79
Trim43aQ3TL54 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43aQ3TL54 Gm21956-201ENSMUST00000179946 522 ntBASIC20■□□□□ 0.79
Trim43aQ3TL54 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms