Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Gm38205-201ENSMUST00000192243 258 ntBASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb2Q91Y00 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb2Q91Y00 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb2Q91Y00 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb2Q91Y00 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb2Q91Y00 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb2Q91Y00 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb2Q91Y00 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
Pcdhb2Q91Y00 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Gm7860-201ENSMUST00000121190 879 ntBASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Gm27405-201ENSMUST00000184201 112 ntBASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb2Q91Y00 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb2Q91Y00 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Gm10849-201ENSMUST00000100397 618 ntBASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Gm7291-201ENSMUST00000199147 382 ntBASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb2Q91Y00 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb2Q91Y00 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.16■□□□□ 0.82
Pcdhb2Q91Y00 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb2Q91Y00 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb2Q91Y00 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.16■□□□□ 0.82
Pcdhb2Q91Y00 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb2Q91Y00 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb2Q91Y00 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb2Q91Y00 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb2Q91Y00 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb2Q91Y00 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Pcdhb2Q91Y00 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.15■□□□□ 0.82
Pcdhb2Q91Y00 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb2Q91Y00 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.15■□□□□ 0.82
Pcdhb2Q91Y00 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb2Q91Y00 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms