Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Herc1E9PZP8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Gm18115-201ENSMUST00000221209 621 ntBASIC10.97□□□□□ -0.65
Herc1E9PZP8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Herc1E9PZP8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.96□□□□□ -0.65
Herc1E9PZP8 Auts2-212ENSMUST00000178555 309 ntBASIC10.96□□□□□ -0.65
Herc1E9PZP8 Otx2os1-204ENSMUST00000227221 751 ntBASIC10.96□□□□□ -0.65
Herc1E9PZP8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Herc1E9PZP8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Herc1E9PZP8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Herc1E9PZP8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Herc1E9PZP8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Herc1E9PZP8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Herc1E9PZP8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.96□□□□□ -0.65
Herc1E9PZP8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Herc1E9PZP8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Herc1E9PZP8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Herc1E9PZP8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Herc1E9PZP8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Herc1E9PZP8 Gm18958-201ENSMUST00000174258 762 ntBASIC10.96□□□□□ -0.66
Herc1E9PZP8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Herc1E9PZP8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC10.96□□□□□ -0.66
Herc1E9PZP8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Herc1E9PZP8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Herc1E9PZP8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.95□□□□□ -0.66
Herc1E9PZP8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Herc1E9PZP8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Herc1E9PZP8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.94□□□□□ -0.66
Herc1E9PZP8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Gm13158-201ENSMUST00000122007 736 ntBASIC10.94□□□□□ -0.66
Herc1E9PZP8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Herc1E9PZP8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Herc1E9PZP8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC10.93□□□□□ -0.66
Herc1E9PZP8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Herc1E9PZP8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc1E9PZP8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc1E9PZP8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Herc1E9PZP8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc1E9PZP8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Herc1E9PZP8 Gm27032-201ENSMUST00000183124 1116 ntBASIC10.93□□□□□ -0.66
Herc1E9PZP8 Odf3b-204ENSMUST00000227834 930 ntBASIC10.93□□□□□ -0.66
Herc1E9PZP8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc1E9PZP8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc1E9PZP8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Herc1E9PZP8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Herc1E9PZP8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC10.93□□□□□ -0.66
Herc1E9PZP8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Herc1E9PZP8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Herc1E9PZP8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Herc1E9PZP8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Herc1E9PZP8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Herc1E9PZP8 Gm27704-201ENSMUST00000185094 107 ntBASIC10.92□□□□□ -0.66
Herc1E9PZP8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Herc1E9PZP8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC10.92□□□□□ -0.66
Herc1E9PZP8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Herc1E9PZP8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms