Protein–RNA interactions for Protein: A0A1L1SQF0

Uncharacterized protein (Fragment), mousemouse

Predictions only

Length 893 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1L1SQF0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
A0A1L1SQF0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
A0A1L1SQF0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
A0A1L1SQF0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.55■■□□□ 1.04
A0A1L1SQF0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.55■■□□□ 1.04
A0A1L1SQF0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
A0A1L1SQF0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
A0A1L1SQF0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
A0A1L1SQF0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.54■■□□□ 1.04
A0A1L1SQF0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
A0A1L1SQF0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
A0A1L1SQF0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
A0A1L1SQF0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
A0A1L1SQF0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
A0A1L1SQF0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
A0A1L1SQF0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
A0A1L1SQF0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
A0A1L1SQF0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
A0A1L1SQF0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
A0A1L1SQF0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
A0A1L1SQF0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
A0A1L1SQF0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
A0A1L1SQF0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
A0A1L1SQF0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
A0A1L1SQF0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
A0A1L1SQF0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
A0A1L1SQF0 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.52■■□□□ 1.04
A0A1L1SQF0 Serp2-204ENSMUST00000228055 705 ntBASIC21.52■■□□□ 1.04
A0A1L1SQF0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
A0A1L1SQF0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
A0A1L1SQF0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
A0A1L1SQF0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1L1SQF0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1L1SQF0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1L1SQF0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1L1SQF0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1L1SQF0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1L1SQF0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1L1SQF0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
A0A1L1SQF0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1L1SQF0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1L1SQF0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A0A1L1SQF0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
A0A1L1SQF0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A0A1L1SQF0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
A0A1L1SQF0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
A0A1L1SQF0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
A0A1L1SQF0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.5■■□□□ 1.03
A0A1L1SQF0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
A0A1L1SQF0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
A0A1L1SQF0 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.5■■□□□ 1.03
A0A1L1SQF0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
A0A1L1SQF0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
A0A1L1SQF0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
A0A1L1SQF0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
A0A1L1SQF0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
A0A1L1SQF0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
A0A1L1SQF0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
A0A1L1SQF0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
A0A1L1SQF0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
A0A1L1SQF0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1L1SQF0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.48■■□□□ 1.03
A0A1L1SQF0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.48■■□□□ 1.03
A0A1L1SQF0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
A0A1L1SQF0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
A0A1L1SQF0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
A0A1L1SQF0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
A0A1L1SQF0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.47■■□□□ 1.03
A0A1L1SQF0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.47■■□□□ 1.03
A0A1L1SQF0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
A0A1L1SQF0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
A0A1L1SQF0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.47■■□□□ 1.03
A0A1L1SQF0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
A0A1L1SQF0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
A0A1L1SQF0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms